Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H3Q8IXZ2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
ZC3H3Q8IXZ2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
ZC3H3Q8IXZ2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZC3H3Q8IXZ2 MIR935-201ENST00000401179 91 ntBASIC23.06■■□□□ 1.28
ZC3H3Q8IXZ2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.06■■□□□ 1.28
ZC3H3Q8IXZ2 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
ZC3H3Q8IXZ2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
ZC3H3Q8IXZ2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.06■■□□□ 1.28
ZC3H3Q8IXZ2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.06■■□□□ 1.28
ZC3H3Q8IXZ2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ZC3H3Q8IXZ2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 AC053503.5-201ENST00000601508 636 ntBASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.04■■□□□ 1.28
ZC3H3Q8IXZ2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H3Q8IXZ2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 ZNRF2P3-201ENST00000424200 374 ntBASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H3Q8IXZ2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
ZC3H3Q8IXZ2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H3Q8IXZ2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3H3Q8IXZ2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H3Q8IXZ2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
ZC3H3Q8IXZ2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H3Q8IXZ2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H3Q8IXZ2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H3Q8IXZ2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H3Q8IXZ2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H3Q8IXZ2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ZC3H3Q8IXZ2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms