Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RSPO1Q2MKA7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.36■□□□□ 0.53
RSPO1Q2MKA7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 AC027612.3-201ENST00000413684 1047 ntBASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 ZNRF2P3-201ENST00000424200 374 ntBASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RSPO1Q2MKA7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 EEF1DP3-203ENST00000566025 782 ntBASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.34■□□□□ 0.53
RSPO1Q2MKA7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RSPO1Q2MKA7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RSPO1Q2MKA7 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 AL049796.1-201ENST00000565336 1766 ntBASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 AC053503.5-201ENST00000601508 636 ntBASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RSPO1Q2MKA7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms