Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.09■□□□□ 0.49
UBA52P62987 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.09■□□□□ 0.49
UBA52P62987 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.09■□□□□ 0.49
UBA52P62987 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.09■□□□□ 0.49
UBA52P62987 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
UBA52P62987 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBA52P62987 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
UBA52P62987 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBA52P62987 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
UBA52P62987 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
UBA52P62987 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBA52P62987 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
UBA52P62987 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.08■□□□□ 0.49
UBA52P62987 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
UBA52P62987 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBA52P62987 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBA52P62987 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBA52P62987 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBA52P62987 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
UBA52P62987 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBA52P62987 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBA52P62987 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBA52P62987 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBA52P62987 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UBA52P62987 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBA52P62987 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.07■□□□□ 0.48
UBA52P62987 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
UBA52P62987 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.07■□□□□ 0.48
UBA52P62987 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.07■□□□□ 0.48
UBA52P62987 YBX1P1-201ENST00000445822 960 ntBASIC18.07■□□□□ 0.48
UBA52P62987 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.07■□□□□ 0.48
UBA52P62987 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 pRNA.6-201ENST00000610482 90 ntBASIC18.07■□□□□ 0.48
UBA52P62987 pRNA.5-201ENST00000612139 90 ntBASIC18.07■□□□□ 0.48
UBA52P62987 pRNA.11-201ENST00000618423 90 ntBASIC18.07■□□□□ 0.48
UBA52P62987 pRNA.13-201ENST00000619112 90 ntBASIC18.07■□□□□ 0.48
UBA52P62987 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
UBA52P62987 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.07■□□□□ 0.48
UBA52P62987 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.07■□□□□ 0.48
UBA52P62987 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
UBA52P62987 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UBA52P62987 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.06■□□□□ 0.48
UBA52P62987 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
UBA52P62987 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.06■□□□□ 0.48
UBA52P62987 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.06■□□□□ 0.48
UBA52P62987 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBA52P62987 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
UBA52P62987 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.06■□□□□ 0.48
UBA52P62987 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
UBA52P62987 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
UBA52P62987 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.06■□□□□ 0.48
UBA52P62987 AC090192.1-201ENST00000517740 490 ntBASIC18.06■□□□□ 0.48
UBA52P62987 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
UBA52P62987 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.06■□□□□ 0.48
UBA52P62987 RARRES2P11-201ENST00000635158 484 ntBASIC18.06■□□□□ 0.48
UBA52P62987 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
UBA52P62987 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
UBA52P62987 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA52P62987 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA52P62987 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
UBA52P62987 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA52P62987 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.05■□□□□ 0.48
UBA52P62987 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.05■□□□□ 0.48
UBA52P62987 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.05■□□□□ 0.48
UBA52P62987 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.05■□□□□ 0.48
UBA52P62987 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
UBA52P62987 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
UBA52P62987 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.05■□□□□ 0.48
UBA52P62987 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.05■□□□□ 0.48
UBA52P62987 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA52P62987 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
UBA52P62987 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
UBA52P62987 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA52P62987 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
UBA52P62987 TSPY26P-201ENST00000476365 1326 ntBASIC18.04■□□□□ 0.48
UBA52P62987 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
UBA52P62987 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
UBA52P62987 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms