Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH6P55285 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDH6P55285 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDH6P55285 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CDH6P55285 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDH6P55285 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CDH6P55285 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH6P55285 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.97■■□□□ 1.11
CDH6P55285 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 IRS3P-201ENST00000223076 1006 ntBASIC21.97■■□□□ 1.11
CDH6P55285 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH6P55285 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.97■■□□□ 1.11
CDH6P55285 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.97■■□□□ 1.11
CDH6P55285 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH6P55285 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDH6P55285 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.97■■□□□ 1.11
CDH6P55285 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH6P55285 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.97■■□□□ 1.11
CDH6P55285 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.97■■□□□ 1.11
CDH6P55285 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.97■■□□□ 1.11
CDH6P55285 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
CDH6P55285 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.97■■□□□ 1.11
CDH6P55285 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDH6P55285 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDH6P55285 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CDH6P55285 AL024507.2-201ENST00000606070 2574 ntBASIC21.96■■□□□ 1.11
CDH6P55285 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CDH6P55285 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
CDH6P55285 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.96■■□□□ 1.11
CDH6P55285 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
CDH6P55285 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDH6P55285 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CDH6P55285 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CDH6P55285 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.95■■□□□ 1.1
CDH6P55285 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CDH6P55285 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CDH6P55285 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CDH6P55285 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.94■■□□□ 1.1
CDH6P55285 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH6P55285 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.94■■□□□ 1.1
CDH6P55285 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.94■■□□□ 1.1
CDH6P55285 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.94■■□□□ 1.1
CDH6P55285 TPRG1LP1-201ENST00000598702 760 ntBASIC21.94■■□□□ 1.1
CDH6P55285 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH6P55285 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.94■■□□□ 1.1
CDH6P55285 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDH6P55285 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CDH6P55285 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDH6P55285 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CDH6P55285 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CDH6P55285 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH6P55285 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH6P55285 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH6P55285 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CDH6P55285 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CDH6P55285 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CDH6P55285 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDH6P55285 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.93■■□□□ 1.1
CDH6P55285 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
CDH6P55285 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.93■■□□□ 1.1
CDH6P55285 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CDH6P55285 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.92■■□□□ 1.1
CDH6P55285 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.92■■□□□ 1.1
CDH6P55285 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CDH6P55285 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms