Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDKN2DP55273 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDKN2DP55273 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.92■□□□□ 0.94
CDKN2DP55273 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN2DP55273 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN2DP55273 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN2DP55273 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN2DP55273 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.91■□□□□ 0.94
CDKN2DP55273 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDKN2DP55273 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.91■□□□□ 0.94
CDKN2DP55273 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.91■□□□□ 0.94
CDKN2DP55273 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2DP55273 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2DP55273 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKN2DP55273 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.9■□□□□ 0.94
CDKN2DP55273 AC142381.2-201ENST00000566120 298 ntBASIC20.9■□□□□ 0.94
CDKN2DP55273 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKN2DP55273 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDKN2DP55273 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.9■□□□□ 0.94
CDKN2DP55273 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.9■□□□□ 0.94
CDKN2DP55273 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2DP55273 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2DP55273 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.89■□□□□ 0.94
CDKN2DP55273 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2DP55273 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.89■□□□□ 0.94
CDKN2DP55273 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2DP55273 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2DP55273 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CDKN2DP55273 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.89■□□□□ 0.94
CDKN2DP55273 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.89■□□□□ 0.93
CDKN2DP55273 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.89■□□□□ 0.93
CDKN2DP55273 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.89■□□□□ 0.93
CDKN2DP55273 AC012414.1-201ENST00000556676 535 ntBASIC20.89■□□□□ 0.93
CDKN2DP55273 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.89■□□□□ 0.93
CDKN2DP55273 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN2DP55273 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDKN2DP55273 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2DP55273 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2DP55273 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.88■□□□□ 0.93
CDKN2DP55273 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2DP55273 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2DP55273 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.88■□□□□ 0.93
CDKN2DP55273 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKN2DP55273 AC005837.3-201ENST00000612163 286 ntBASIC20.88■□□□□ 0.93
CDKN2DP55273 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CDKN2DP55273 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKN2DP55273 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.88■□□□□ 0.93
CDKN2DP55273 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CDKN2DP55273 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDKN2DP55273 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.87■□□□□ 0.93
CDKN2DP55273 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.87■□□□□ 0.93
CDKN2DP55273 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CDKN2DP55273 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.87■□□□□ 0.93
CDKN2DP55273 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.87■□□□□ 0.93
CDKN2DP55273 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.87■□□□□ 0.93
CDKN2DP55273 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.87■□□□□ 0.93
CDKN2DP55273 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.87■□□□□ 0.93
CDKN2DP55273 AL049796.1-201ENST00000565336 1766 ntBASIC20.87■□□□□ 0.93
CDKN2DP55273 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDKN2DP55273 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.86■□□□□ 0.93
CDKN2DP55273 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.86■□□□□ 0.93
CDKN2DP55273 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2DP55273 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDKN2DP55273 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2DP55273 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
CDKN2DP55273 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2DP55273 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.86■□□□□ 0.93
CDKN2DP55273 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2DP55273 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.86■□□□□ 0.93
CDKN2DP55273 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.86■□□□□ 0.93
CDKN2DP55273 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.86■□□□□ 0.93
CDKN2DP55273 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.86■□□□□ 0.93
CDKN2DP55273 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2DP55273 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2DP55273 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDKN2DP55273 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN2DP55273 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.85■□□□□ 0.93
CDKN2DP55273 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.85■□□□□ 0.93
CDKN2DP55273 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN2DP55273 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN2DP55273 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.85■□□□□ 0.93
CDKN2DP55273 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.85■□□□□ 0.93
CDKN2DP55273 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN2DP55273 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.85■□□□□ 0.93
CDKN2DP55273 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.85■□□□□ 0.93
CDKN2DP55273 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDKN2DP55273 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDKN2DP55273 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms