Protein–RNA interactions for Protein: P12956

XRCC6, X-ray repair cross-complementing protein 6, humanhuman

Known RBP eCLIP

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC6P12956 SNORD12B-201ENST00000410433 91 ntBASIC2.78□□□□□ -1.963e-30■■□□□ 11.5
XRCC6P12956 TMC6-210ENST00000588792 843 ntTSL 220.35■□□□□ 0.859e-8■■□□□ 11.5
XRCC6P12956 TMC6-205ENST00000586126 821 ntTSL 318.48■□□□□ 0.559e-8■■□□□ 11.5
XRCC6P12956 TMC6-223ENST00000592594 551 ntTSL 418.16■□□□□ 0.59e-8■■□□□ 11.5
XRCC6P12956 TMC6-221ENST00000592063 743 ntTSL 515.59■□□□□ 0.099e-8■■□□□ 11.5
XRCC6P12956 RPL3-207ENST00000459859 447 ntTSL 322.25■■□□□ 1.152e-22■■□□□ 11.5
XRCC6P12956 RPL3-218ENST00000498462 669 ntTSL 320.69■□□□□ 0.92e-22■■□□□ 11.5
XRCC6P12956 RPL3-203ENST00000402527 1205 ntTSL 520.34■□□□□ 0.852e-22■■□□□ 11.5
XRCC6P12956 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.842e-22■■□□□ 11.5
XRCC6P12956 RPL3-208ENST00000460589 630 ntTSL 218.81■□□□□ 0.62e-22■■□□□ 11.5
XRCC6P12956 RPL3-211ENST00000465618 2108 ntTSL 1 (best)16.47■□□□□ 0.232e-22■■□□□ 11.5
XRCC6P12956 RPL3-205ENST00000427905 782 ntTSL 515.84■□□□□ 0.132e-22■■□□□ 11.5
XRCC6P12956 RPL3-206ENST00000453303 916 ntTSL 515.08■□□□□ 02e-22■■□□□ 11.5
XRCC6P12956 RPL3-217ENST00000484615 827 ntTSL 214.54□□□□□ -0.082e-22■■□□□ 11.5
XRCC6P12956 RPL3-209ENST00000461967 767 ntTSL 214.48□□□□□ -0.092e-22■■□□□ 11.5
XRCC6P12956 RPL3-204ENST00000420536 711 ntTSL 510.27□□□□□ -0.772e-22■■□□□ 11.5
XRCC6P12956 PRMT1-216ENST00000530361 866 ntTSL 319.67■□□□□ 0.748e-6■■□□□ 11.5
XRCC6P12956 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.521e-8■■□□□ 11.4
XRCC6P12956 SNTB1-203ENST00000519177 1962 ntTSL 1 (best)22.24■■□□□ 1.151e-8■■□□□ 11.4
XRCC6P12956 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.721e-8■■□□□ 11.4
XRCC6P12956 DDX17-209ENST00000479734 441 ntTSL 417.58■□□□□ 0.42e-10■■□□□ 11.4
XRCC6P12956 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.232e-6■■□□□ 11.4
XRCC6P12956 PSPC1-204ENST00000492741 1709 ntTSL 224.56■■□□□ 1.529e-14■■□□□ 11.4
XRCC6P12956 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.389e-14■■□□□ 11.4
XRCC6P12956 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.189e-14■■□□□ 11.4
XRCC6P12956 PSPC1-203ENST00000471658 1647 ntTSL 1 (best)21.4■■□□□ 1.029e-14■■□□□ 11.4
XRCC6P12956 PSPC1-208ENST00000635562 422 ntTSL 33.14□□□□□ -1.919e-14■■□□□ 11.4
XRCC6P12956 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.994e-12■■□□□ 11.4
XRCC6P12956 HBG2-203ENST00000380259 1772 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.374e-6■■□□□ 11.4
XRCC6P12956 HBG2-202ENST00000380252 694 ntTSL 3 BASIC11.69□□□□□ -0.544e-6■■□□□ 11.4
XRCC6P12956 AHNAK-208ENST00000533365 584 ntAPPRIS ALT2 TSL 521.64■■□□□ 1.053e-9■■□□□ 11.4
XRCC6P12956 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.323e-9■■□□□ 11.4
XRCC6P12956 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.13e-9■■□□□ 11.4
XRCC6P12956 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.433e-9■■□□□ 11.4
XRCC6P12956 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.311e-9■□□□□ 11.3
XRCC6P12956 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.158e-6■□□□□ 11.3
XRCC6P12956 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.798e-6■□□□□ 11.3
XRCC6P12956 FILIP1L-207ENST00000476723 567 ntTSL 418.42■□□□□ 0.543e-8■□□□□ 11.3
XRCC6P12956 ITIH3-208ENST00000475931 558 ntTSL 317.49■□□□□ 0.393e-8■□□□□ 11.3
XRCC6P12956 ITIH3-210ENST00000495622 920 ntTSL 516.58■□□□□ 0.243e-8■□□□□ 11.3
XRCC6P12956 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC16.11■□□□□ 0.173e-8■□□□□ 11.3
XRCC6P12956 ITIH3-201ENST00000416872 2220 ntTSL 2 BASIC14.33□□□□□ -0.123e-8■□□□□ 11.3
XRCC6P12956 FILIP1L-210ENST00000495625 2898 ntTSL 1 (best)13.89□□□□□ -0.193e-8■□□□□ 11.3
XRCC6P12956 RBM12B-208ENST00000627241 2646 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.222e-10■□□□□ 11.3
XRCC6P12956 RBM12B-201ENST00000399300 7269 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.252e-10■□□□□ 11.3
XRCC6P12956 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC11.53□□□□□ -0.568e-6■□□□□ 11.3
XRCC6P12956 MTHFD1L-210ENST00000478643 421 ntTSL 311.08□□□□□ -0.648e-6■□□□□ 11.3
XRCC6P12956 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC10.93□□□□□ -0.663e-8■□□□□ 11.3
XRCC6P12956 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.713e-8■□□□□ 11.3
XRCC6P12956 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.732e-10■□□□□ 11.3
XRCC6P12956 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.26□□□□□ -1.253e-8■□□□□ 11.3
XRCC6P12956 RBM12B-206ENST00000520961 507 ntTSL 36.75□□□□□ -1.332e-10■□□□□ 11.3
XRCC6P12956 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.413e-8■□□□□ 11.3
XRCC6P12956 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.7□□□□□ -1.663e-8■□□□□ 11.3
XRCC6P12956 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.62□□□□□ -1.833e-8■□□□□ 11.3
XRCC6P12956 MKI67-202ENST00000368654 12678 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.774e-6■□□□□ 11.3
XRCC6P12956 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.53□□□□□ -0.728e-8■□□□□ 11.3
XRCC6P12956 XIST-202ENST00000417942 724 ntTSL 37.49□□□□□ -1.218e-8■□□□□ 11.3
XRCC6P12956 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.37□□□□□ -1.398e-8■□□□□ 11.3
XRCC6P12956 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.96□□□□□ -1.468e-8■□□□□ 11.3
XRCC6P12956 XIST-203ENST00000421322 446 ntTSL 23.48□□□□□ -1.858e-8■□□□□ 11.3
XRCC6P12956 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.39■■□□□ 1.171e-6■□□□□ 11.3
XRCC6P12956 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.721e-6■□□□□ 11.3
XRCC6P12956 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.271e-6■□□□□ 11.3
XRCC6P12956 EXT1-203ENST00000437196 1446 ntTSL 515.09■□□□□ 0.011e-6■□□□□ 11.3
XRCC6P12956 EPS8-211ENST00000543468 3722 ntTSL 1 (best)14.9□□□□□ -0.021e-6■□□□□ 11.3
XRCC6P12956 EPS8-212ENST00000543523 3925 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.131e-6■□□□□ 11.3
XRCC6P12956 EXT1-202ENST00000436216 700 ntTSL 313.86□□□□□ -0.191e-6■□□□□ 11.3
XRCC6P12956 EPS8-216ENST00000546261 655 ntTSL 312.75□□□□□ -0.371e-6■□□□□ 11.3
XRCC6P12956 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC12.58□□□□□ -0.391e-6■□□□□ 11.3
XRCC6P12956 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC11.31□□□□□ -0.61e-6■□□□□ 11.3
XRCC6P12956 AGAP1-208ENST00000448025 757 ntTSL 510.31□□□□□ -0.761e-6■□□□□ 11.3
XRCC6P12956 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.761e-6■□□□□ 11.3
XRCC6P12956 AGAP1-206ENST00000418654 826 ntTSL 39.89□□□□□ -0.831e-6■□□□□ 11.3
XRCC6P12956 AC074143.1-201ENST00000580114 1287 ntAPPRIS P5 TSL 528.55■■■□□ 2.166e-9■□□□□ 11.3
XRCC6P12956 HSF4-214ENST00000521314 1555 ntTSL 525.88■■□□□ 1.736e-9■□□□□ 11.3
XRCC6P12956 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.6■■□□□ 1.696e-9■□□□□ 11.3
XRCC6P12956 HSF4-224ENST00000523562 1839 ntTSL 225.28■■□□□ 1.646e-9■□□□□ 11.3
XRCC6P12956 HSF4-222ENST00000522870 1599 ntTSL 525.1■■□□□ 1.616e-9■□□□□ 11.3
XRCC6P12956 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.456e-9■□□□□ 11.3
XRCC6P12956 HSF4-220ENST00000522295 1539 ntTSL 524.03■■□□□ 1.446e-9■□□□□ 11.3
XRCC6P12956 HSF4-203ENST00000517685 1249 ntTSL 523.85■■□□□ 1.416e-9■□□□□ 11.3
XRCC6P12956 HSF4-201ENST00000434833 1568 ntTSL 1 (best)23.75■■□□□ 1.396e-9■□□□□ 11.3
XRCC6P12956 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.386e-9■□□□□ 11.3
XRCC6P12956 HSF4-216ENST00000521624 1358 ntTSL 1 (best)22.22■■□□□ 1.156e-9■□□□□ 11.3
XRCC6P12956 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.98■■□□□ 1.116e-9■□□□□ 11.3
XRCC6P12956 HSF4-218ENST00000522023 636 ntTSL 420.82■□□□□ 0.926e-9■□□□□ 11.3
XRCC6P12956 HSF4-223ENST00000523077 828 ntTSL 220.34■□□□□ 0.856e-9■□□□□ 11.3
XRCC6P12956 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.696e-9■□□□□ 11.3
XRCC6P12956 GIPR-206ENST00000591224 782 ntTSL 218.24■□□□□ 0.516e-9■□□□□ 11.3
XRCC6P12956 AC074143.1-202ENST00000518753 501 ntAPPRIS ALT2 TSL 517.17■□□□□ 0.346e-9■□□□□ 11.3
XRCC6P12956 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.99■□□□□ 0.316e-9■□□□□ 11.3
XRCC6P12956 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.146e-9■□□□□ 11.3
XRCC6P12956 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.166e-9■□□□□ 11.3
XRCC6P12956 FAM83A-208ENST00000536633 3701 ntTSL 2 BASIC13.59□□□□□ -0.236e-9■□□□□ 11.3
XRCC6P12956 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.466e-9■□□□□ 11.3
XRCC6P12956 GIPR-208ENST00000593127 153 ntTSL 511.98□□□□□ -0.496e-9■□□□□ 11.3
XRCC6P12956 MAN2A2-215ENST00000559704 449 ntTSL 35.01□□□□□ -1.616e-9■□□□□ 11.3
XRCC6P12956 DAZAP1-209ENST00000590419 508 ntTSL 316.17■□□□□ 0.188e-8■□□□□ 11.3
XRCC6P12956 SPPL2B-213ENST00000621568 1017 ntTSL 519.98■□□□□ 0.796e-7■□□□□ 11.3
Retrieved 100 of 6,788 protein–RNA pairs in 47.7 ms