RNA–Protein interactions for RNA: ENST00000520961.1

RBM12B-206, Transcript of RNA binding motif protein 12B, humanhuman

TSL 3

Gene RBM12B, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM12B-206ENST00000520961 AEBP2Q6ZN18 517 aaPredicted RBP33.63■■■□□ 2.97
RBM12B-206ENST00000520961 CHIC1Q5VXU3 224 aa32.53■■■□□ 2.8
RBM12B-206ENST00000520961 SENP3Q9H4L4 574 aaPredicted RBP28.61■■■□□ 2.17
RBM12B-206ENST00000520961 PHF23Q9BUL5 403 aaPredicted RBP28.56■■■□□ 2.16
RBM12B-206ENST00000520961 FOXD1Q16676 465 aa26.59■■□□□ 1.85
RBM12B-206ENST00000520961 PLPPR3Q6T4P5 718 aa26.29■■□□□ 1.8
RBM12B-206ENST00000520961 PPP6R1Q9UPN7 881 aa25.32■■□□□ 1.64
RBM12B-206ENST00000520961 ADRA2BP18089 450 aa25.3■■□□□ 1.64
RBM12B-206ENST00000520961 PIAS4Q8N2W9 510 aaPredicted RBP25.01■■□□□ 1.59
RBM12B-206ENST00000520961 MSH5O43196 834 aa24.65■■□□□ 1.54
RBM12B-206ENST00000520961 SCAF1Q9H7N4 1312 aaKnown RBP23.17■■□□□ 1.3
RBM12B-206ENST00000520961 PPP4R3CPQ6ZMV5 832 aa23.13■■□□□ 1.29
RBM12B-206ENST00000520961 MAPK8IP2Q13387 824 aaPredicted RBP23.06■■□□□ 1.28
RBM12B-206ENST00000520961 POTEDQ86YR6 584 aa23.02■■□□□ 1.28
RBM12B-206ENST00000520961 DMRT2Q9Y5R5 561 aa22.77■■□□□ 1.24
RBM12B-206ENST00000520961 CNKSR2Q8WXI2 1034 aa22.55■■□□□ 1.2
RBM12B-206ENST00000520961 NCBP3Q53F19 620 aaKnown RBP22.44■■□□□ 1.18
RBM12B-206ENST00000520961 KCNA4P22459 653 aa22.22■■□□□ 1.15
RBM12B-206ENST00000520961 RNF216Q9NWF9 866 aaPredicted RBP22.18■■□□□ 1.14
RBM12B-206ENST00000520961 HOXD11P31277 338 aaPredicted RBP22.17■■□□□ 1.14
RBM12B-206ENST00000520961 NPM3O75607 178 aaKnown RBP22.09■■□□□ 1.13
RBM12B-206ENST00000520961 DCAF8L1A6NGE4 600 aa21.88■■□□□ 1.09
RBM12B-206ENST00000520961 DNAJC5BQ9UF47 199 aa21.43■■□□□ 1.02
RBM12B-206ENST00000520961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.981e-8■■■■□ 19.6
RBM12B-206ENST00000520961 SLC4A1APQ9BWU0 796 aaKnown RBP21.12■□□□□ 0.97
RBM12B-206ENST00000520961 RNF39Q9H2S5 420 aa21.07■□□□□ 0.96
RBM12B-206ENST00000520961 SLC4A2P04920 1241 aa20.93■□□□□ 0.94
RBM12B-206ENST00000520961 CACNB1Q02641 598 aaPredicted RBP20.82■□□□□ 0.92
RBM12B-206ENST00000520961 C1QBPQ07021 282 aaKnown RBP20.81■□□□□ 0.92
RBM12B-206ENST00000520961 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
RBM12B-206ENST00000520961 FOXD4L1Q9NU39 408 aa20.54■□□□□ 0.88
RBM12B-206ENST00000520961 MYCNP04198 464 aaPredicted RBP20.42■□□□□ 0.86
RBM12B-206ENST00000520961 ZBTB22O15209 634 aa20.41■□□□□ 0.86
RBM12B-206ENST00000520961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.4■□□□□ 0.86
RBM12B-206ENST00000520961 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
RBM12B-206ENST00000520961 SAMD1Q6SPF0 538 aaPredicted RBP20.31■□□□□ 0.84
RBM12B-206ENST00000520961 SPINK5Q9NQ38 1064 aaPredicted RBP20.29■□□□□ 0.84
RBM12B-206ENST00000520961 APLP2Q06481 763 aa20.28■□□□□ 0.84
RBM12B-206ENST00000520961 CAPN15O75808 1086 aa20.26■□□□□ 0.83
RBM12B-206ENST00000520961 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
RBM12B-206ENST00000520961 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
RBM12B-206ENST00000520961 CSRNP3Q8WYN3 585 aa20.04■□□□□ 0.8
RBM12B-206ENST00000520961 ZNF219Q9P2Y4 722 aaPredicted RBP20.04■□□□□ 0.8
RBM12B-206ENST00000520961 DSG3P32926 999 aa19.95■□□□□ 0.78
RBM12B-206ENST00000520961 ATF5Q9Y2D1 282 aaPredicted RBP19.9■□□□□ 0.78
RBM12B-206ENST00000520961 ABCB7O75027 752 aa19.84■□□□□ 0.77
RBM12B-206ENST00000520961 ATXN8OSP0DMR3 200 aa19.84■□□□□ 0.77
RBM12B-206ENST00000520961 POLA2Q14181 598 aa19.67■□□□□ 0.74
RBM12B-206ENST00000520961 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
RBM12B-206ENST00000520961 FBLN2P98095 1184 aa19.12■□□□□ 0.65
RBM12B-206ENST00000520961 RBM42Q9BTD8 480 aaKnown RBP19.04■□□□□ 0.64
RBM12B-206ENST00000520961 MKRN4PQ13434 485 aaPredicted RBP19.01■□□□□ 0.63
RBM12B-206ENST00000520961 OSCARQ8IYS5 282 aa19.01■□□□□ 0.63
RBM12B-206ENST00000520961 SPDYE2BA6NHP3 402 aa18.75■□□□□ 0.59
RBM12B-206ENST00000520961 SPDYE6P0CI01 402 aa18.75■□□□□ 0.59
RBM12B-206ENST00000520961 SPDYE2Q495Y8 402 aa18.75■□□□□ 0.59
RBM12B-206ENST00000520961 AKT1S1Q96B36 256 aa18.72■□□□□ 0.59
RBM12B-206ENST00000520961 ZNF692Q9BU19 519 aaPredicted RBP18.66■□□□□ 0.58
RBM12B-206ENST00000520961 REM2Q8IYK8 340 aaPredicted RBP18.55■□□□□ 0.56
RBM12B-206ENST00000520961 SSUH2Q9Y2M2 353 aa18.55■□□□□ 0.56
RBM12B-206ENST00000520961 SPDYE4A6NLX3 237 aa18.45■□□□□ 0.54
RBM12B-206ENST00000520961 PABPN1Q86U42 306 aaKnown RBP eCLIP18.4■□□□□ 0.54
RBM12B-206ENST00000520961 CHRDL2Q6WN34 429 aa18.37■□□□□ 0.53
RBM12B-206ENST00000520961 PITPNM1O00562 1244 aa18.34■□□□□ 0.53
RBM12B-206ENST00000520961 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
RBM12B-206ENST00000520961 CLEC11AQ9Y240 323 aa18.26■□□□□ 0.51
RBM12B-206ENST00000520961 FKBP8Q14318 412 aa18.17■□□□□ 0.5
RBM12B-206ENST00000520961 POTEHQ6S545 545 aa18.17■□□□□ 0.5
RBM12B-206ENST00000520961 PIP4P2Q8N4L2 257 aa18.07■□□□□ 0.48
RBM12B-206ENST00000520961 FXR2P51116 673 aaKnown RBP eCLIP18.05■□□□□ 0.48
RBM12B-206ENST00000520961 PRR29P0C7W0 189 aa18.04■□□□□ 0.48
RBM12B-206ENST00000520961 PROM2Q8N271 834 aa18.04■□□□□ 0.48
RBM12B-206ENST00000520961 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
RBM12B-206ENST00000520961 PRKAR2AP13861 404 aaKnown RBP17.9■□□□□ 0.46
RBM12B-206ENST00000520961 CHADLQ6NUI6 762 aa17.83■□□□□ 0.44
RBM12B-206ENST00000520961 CREBZFQ9NS37 354 aa17.7■□□□□ 0.42
RBM12B-206ENST00000520961 HAX1O00165 279 aa17.61■□□□□ 0.41
RBM12B-206ENST00000520961 FBXO3Q9UK99 471 aa17.61■□□□□ 0.41
RBM12B-206ENST00000520961 FARP1Q9Y4F1 1045 aaPredicted RBP17.61■□□□□ 0.41
RBM12B-206ENST00000520961 MIER1Q8N108 512 aa17.56■□□□□ 0.4
RBM12B-206ENST00000520961 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
RBM12B-206ENST00000520961 PLCD3Q8N3E9 789 aa17.5■□□□□ 0.39
RBM12B-206ENST00000520961 C19orf67A6NJJ6 358 aa17.45■□□□□ 0.38
RBM12B-206ENST00000520961 MNX1P50219 401 aaPredicted RBP17.45■□□□□ 0.38
RBM12B-206ENST00000520961 NPM1P06748 294 aaKnown RBP eCLIP17.43■□□□□ 0.38
RBM12B-206ENST00000520961 EVX2Q03828 476 aa17.4■□□□□ 0.38
RBM12B-206ENST00000520961 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
RBM12B-206ENST00000520961 VASPP50552 380 aaPredicted RBP17.36■□□□□ 0.37
RBM12B-206ENST00000520961 SP7Q8TDD2 431 aaPredicted RBP17.32■□□□□ 0.36
RBM12B-206ENST00000520961 ZBTB47Q9UFB7 747 aaPredicted RBP17.3■□□□□ 0.36
RBM12B-206ENST00000520961 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
RBM12B-206ENST00000520961 ZRANB1Q9UGI0 708 aa17.23■□□□□ 0.35
RBM12B-206ENST00000520961 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
RBM12B-206ENST00000520961 TSPYL2Q9H2G4 693 aaPredicted RBP17.14■□□□□ 0.33
RBM12B-206ENST00000520961 RASEFQ8IZ41 740 aa17.12■□□□□ 0.33
RBM12B-206ENST00000520961 NUBP1P53384 320 aa17.1■□□□□ 0.33
RBM12B-206ENST00000520961 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
RBM12B-206ENST00000520961 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
RBM12B-206ENST00000520961 GABBR2O75899 941 aa17.06■□□□□ 0.32
RBM12B-206ENST00000520961 PHF12Q96QT6 1004 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms