Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD48P09326 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.95■■□□□ 1.1
CD48P09326 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CD48P09326 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CD48P09326 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CD48P09326 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.94■■□□□ 1.1
CD48P09326 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.94■■□□□ 1.1
CD48P09326 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.94■■□□□ 1.1
CD48P09326 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.94■■□□□ 1.1
CD48P09326 TPRG1LP1-201ENST00000598702 760 ntBASIC21.94■■□□□ 1.1
CD48P09326 AL354811.1-201ENST00000610286 706 ntBASIC21.94■■□□□ 1.1
CD48P09326 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.94■■□□□ 1.1
CD48P09326 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.94■■□□□ 1.1
CD48P09326 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
CD48P09326 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD48P09326 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.93■■□□□ 1.1
CD48P09326 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.93■■□□□ 1.1
CD48P09326 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.93■■□□□ 1.1
CD48P09326 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CD48P09326 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CD48P09326 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CD48P09326 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.92■■□□□ 1.1
CD48P09326 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CD48P09326 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.92■■□□□ 1.1
CD48P09326 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD48P09326 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD48P09326 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.92■■□□□ 1.1
CD48P09326 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.92■■□□□ 1.1
CD48P09326 IRS3P-201ENST00000223076 1006 ntBASIC21.92■■□□□ 1.1
CD48P09326 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.92■■□□□ 1.1
CD48P09326 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.92■■□□□ 1.1
CD48P09326 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.92■■□□□ 1.1
CD48P09326 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CD48P09326 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CD48P09326 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.92■■□□□ 1.1
CD48P09326 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.91■■□□□ 1.1
CD48P09326 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
CD48P09326 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 AL358852.1-201ENST00000623174 1268 ntBASIC21.91■■□□□ 1.1
CD48P09326 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
CD48P09326 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.91■■□□□ 1.1
CD48P09326 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CD48P09326 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD48P09326 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
CD48P09326 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CD48P09326 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CD48P09326 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.9■■□□□ 1.1
CD48P09326 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
CD48P09326 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.9■■□□□ 1.1
CD48P09326 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.9■■□□□ 1.1
CD48P09326 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.9■■□□□ 1.1
CD48P09326 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.9■■□□□ 1.1
CD48P09326 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.9■■□□□ 1.1
CD48P09326 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD48P09326 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD48P09326 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.89■■□□□ 1.1
CD48P09326 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.89■■□□□ 1.1
CD48P09326 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD48P09326 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CD48P09326 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.89■■□□□ 1.09
CD48P09326 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CD48P09326 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CD48P09326 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.89■■□□□ 1.09
CD48P09326 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.89■■□□□ 1.09
CD48P09326 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.89■■□□□ 1.09
CD48P09326 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms