Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD3DP04234 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CD3DP04234 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CD3DP04234 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.92■□□□□ 0.46
CD3DP04234 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.91■□□□□ 0.46
CD3DP04234 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.91■□□□□ 0.46
CD3DP04234 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.91■□□□□ 0.46
CD3DP04234 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.91■□□□□ 0.46
CD3DP04234 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.91■□□□□ 0.46
CD3DP04234 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CD3DP04234 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.91■□□□□ 0.46
CD3DP04234 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CD3DP04234 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.9■□□□□ 0.46
CD3DP04234 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.9■□□□□ 0.46
CD3DP04234 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CD3DP04234 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CD3DP04234 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CD3DP04234 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.9■□□□□ 0.46
CD3DP04234 AC006128.1-201ENST00000624704 1661 ntBASIC17.9■□□□□ 0.46
CD3DP04234 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.89■□□□□ 0.46
CD3DP04234 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.89■□□□□ 0.46
CD3DP04234 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD3DP04234 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD3DP04234 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CD3DP04234 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.89■□□□□ 0.45
CD3DP04234 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CD3DP04234 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD3DP04234 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CD3DP04234 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CD3DP04234 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.89■□□□□ 0.45
CD3DP04234 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.89■□□□□ 0.45
CD3DP04234 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CD3DP04234 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.88■□□□□ 0.45
CD3DP04234 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.88■□□□□ 0.45
CD3DP04234 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.88■□□□□ 0.45
CD3DP04234 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.88■□□□□ 0.45
CD3DP04234 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.88■□□□□ 0.45
CD3DP04234 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.88■□□□□ 0.45
CD3DP04234 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.88■□□□□ 0.45
CD3DP04234 HSD17B1P1-201ENST00000590052 955 ntBASIC17.88■□□□□ 0.45
CD3DP04234 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CD3DP04234 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.88■□□□□ 0.45
CD3DP04234 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CD3DP04234 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.88■□□□□ 0.45
CD3DP04234 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CD3DP04234 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CD3DP04234 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms