Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.7■□□□□ 0.9
VGLL3A8MV65 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
VGLL3A8MV65 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.7■□□□□ 0.9
VGLL3A8MV65 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
VGLL3A8MV65 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.7■□□□□ 0.9
VGLL3A8MV65 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
VGLL3A8MV65 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.69■□□□□ 0.9
VGLL3A8MV65 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VGLL3A8MV65 AC116562.4-201ENST00000641316 2276 ntBASIC20.69■□□□□ 0.9
VGLL3A8MV65 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
VGLL3A8MV65 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.69■□□□□ 0.9
VGLL3A8MV65 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 AC079630.1-202ENST00000618127 1840 ntBASIC20.69■□□□□ 0.9
VGLL3A8MV65 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
VGLL3A8MV65 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.69■□□□□ 0.9
VGLL3A8MV65 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
VGLL3A8MV65 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
VGLL3A8MV65 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
VGLL3A8MV65 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 AC020763.4-201ENST00000623414 4170 ntBASIC20.68■□□□□ 0.9
VGLL3A8MV65 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
VGLL3A8MV65 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.68■□□□□ 0.9
VGLL3A8MV65 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.68■□□□□ 0.9
VGLL3A8MV65 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.68■□□□□ 0.9
VGLL3A8MV65 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
VGLL3A8MV65 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
VGLL3A8MV65 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.67■□□□□ 0.9
VGLL3A8MV65 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VGLL3A8MV65 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
VGLL3A8MV65 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.67■□□□□ 0.9
VGLL3A8MV65 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
VGLL3A8MV65 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
VGLL3A8MV65 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
VGLL3A8MV65 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
VGLL3A8MV65 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
VGLL3A8MV65 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
VGLL3A8MV65 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.65■□□□□ 0.9
VGLL3A8MV65 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
VGLL3A8MV65 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 MIR4449-201ENST00000578365 66 ntBASIC20.65■□□□□ 0.9
VGLL3A8MV65 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
VGLL3A8MV65 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.65■□□□□ 0.9
VGLL3A8MV65 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms