Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 AL358852.1-201ENST00000623174 1268 ntBASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.71■□□□□ 0.59
IGKV1D-43A0A0B4J1Z2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.68■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 ZNRF2P3-201ENST00000424200 374 ntBASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IGKV1D-43A0A0B4J1Z2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms