Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
AP4S1Q9Y587 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
AP4S1Q9Y587 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20■□□□□ 0.79
AP4S1Q9Y587 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
AP4S1Q9Y587 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20■□□□□ 0.79
AP4S1Q9Y587 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20■□□□□ 0.79
AP4S1Q9Y587 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20■□□□□ 0.79
AP4S1Q9Y587 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
AP4S1Q9Y587 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
AP4S1Q9Y587 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
AP4S1Q9Y587 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20■□□□□ 0.79
AP4S1Q9Y587 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20■□□□□ 0.79
AP4S1Q9Y587 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 BHLHE23-202ENST00000612929 1109 ntBASIC19.99■□□□□ 0.79
AP4S1Q9Y587 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 AC073314.1-201ENST00000568729 2216 ntBASIC19.99■□□□□ 0.79
AP4S1Q9Y587 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AP4S1Q9Y587 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 PVT1_1.1-201ENST00000615125 194 ntBASIC19.98■□□□□ 0.79
AP4S1Q9Y587 MIR6722-201ENST00000617286 78 ntBASIC19.98■□□□□ 0.79
AP4S1Q9Y587 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
AP4S1Q9Y587 AFG3L1P-217ENST00000557444 2447 ntBASIC19.97■□□□□ 0.79
AP4S1Q9Y587 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 OR7E47P-201ENST00000546390 1422 ntBASIC19.97■□□□□ 0.79
AP4S1Q9Y587 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AP4S1Q9Y587 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 PCDHAC2-203ENST00000615316 3011 ntBASIC19.96■□□□□ 0.79
AP4S1Q9Y587 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AP4S1Q9Y587 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
AP4S1Q9Y587 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4S1Q9Y587 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms