Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 AC135983.2-203ENST00000454486 1613 ntBASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CYSTM1Q9H1C7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 AC009053.2-201ENST00000563701 2365 ntBASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CYSTM1Q9H1C7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CYSTM1Q9H1C7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CYSTM1Q9H1C7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms