Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 LGALS3BP-217ENST00000591274 379 ntTSL 515.75■□□□□ 0.118e-35■■■■□ 19.6
SND1Q7KZF4 TCN1-204ENST00000533734 293 ntTSL 37.76□□□□□ -1.172e-16■■■■□ 19.5
SND1Q7KZF4 SFT2D1-206ENST00000494682 359 ntTSL 36.99□□□□□ -1.291e-6■■■■□ 19.5
SND1Q7KZF4 CHID1-208ENST00000525225 523 ntTSL 511.85□□□□□ -0.511e-6■■■■□ 19.5
SND1Q7KZF4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.68■■□□□ 1.227e-8■■■■□ 19.5
SND1Q7KZF4 TMEM161A-204ENST00000587096 1065 ntTSL 519.13■□□□□ 0.657e-8■■■■□ 19.5
SND1Q7KZF4 TMEM161A-209ENST00000587985 1754 ntTSL 518.48■□□□□ 0.557e-8■■■■□ 19.5
SND1Q7KZF4 TMEM161A-205ENST00000587406 1923 ntTSL 517.59■□□□□ 0.417e-8■■■■□ 19.5
SND1Q7KZF4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.47e-8■■■■□ 19.5
SND1Q7KZF4 TMEM161A-210ENST00000589448 1799 ntTSL 517.4■□□□□ 0.387e-8■■■■□ 19.5
SND1Q7KZF4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.58■□□□□ 0.247e-8■■■■□ 19.5
SND1Q7KZF4 TMEM161A-208ENST00000587925 582 ntTSL 316.43■□□□□ 0.227e-8■■■■□ 19.5
SND1Q7KZF4 APLP2-215ENST00000530493 1322 ntTSL 211.39□□□□□ -0.591e-14■■■■□ 19.5
SND1Q7KZF4 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.7□□□□□ -0.067e-7■■■■□ 19.5
SND1Q7KZF4 ERAP1-202ENST00000443439 4805 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.027e-7■■■■□ 19.5
SND1Q7KZF4 HSP90B1-209ENST00000552051 581 ntTSL 29.08□□□□□ -0.961e-40■■■■□ 19.5
SND1Q7KZF4 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.552e-8■■■■□ 19.5
SND1Q7KZF4 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.552e-8■■■■□ 19.5
SND1Q7KZF4 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.552e-8■■■■□ 19.5
SND1Q7KZF4 IFNGR1-202ENST00000414770 748 ntTSL 323.29■■□□□ 1.322e-7■■■■□ 19.5
SND1Q7KZF4 IFNGR1-203ENST00000458076 753 ntTSL 316.42■□□□□ 0.222e-7■■■■□ 19.5
SND1Q7KZF4 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.32e-6■■■■□ 19.5
SND1Q7KZF4 NARS-204ENST00000586807 1608 ntTSL 212.59□□□□□ -0.392e-6■■■■□ 19.5
SND1Q7KZF4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.516e-7■■■■□ 19.5
SND1Q7KZF4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.38e-7■■■■□ 19.5
SND1Q7KZF4 FCGR2A-209ENST00000482233 444 ntTSL 210.48□□□□□ -0.738e-7■■■■□ 19.5
SND1Q7KZF4 SERPINF1-208ENST00000572517 672 ntTSL 211.94□□□□□ -0.51e-30■■■■□ 19.5
SND1Q7KZF4 NCLN-208ENST00000592737 2735 ntTSL 319.13■□□□□ 0.659e-8■■■■□ 19.5
SND1Q7KZF4 NCLN-202ENST00000586904 836 ntTSL 517.5■□□□□ 0.399e-8■■■■□ 19.5
SND1Q7KZF4 NCLN-203ENST00000587740 1210 ntTSL 1 (best)16.13■□□□□ 0.179e-8■■■■□ 19.5
SND1Q7KZF4 JAG1-207ENST00000617965 837 ntTSL 513.92□□□□□ -0.182e-7■■■■□ 19.5
SND1Q7KZF4 MARCH6-203ENST00000502795 580 ntTSL 414.59□□□□□ -0.074e-8■■■■□ 19.5
SND1Q7KZF4 TF-207ENST00000467842 4602 ntTSL 1 (best)7.89□□□□□ -1.152e-36■■■■□ 19.5
SND1Q7KZF4 MSLN-203ENST00000561896 1195 ntTSL 526.24■■□□□ 1.793e-9■■■■□ 19.5
SND1Q7KZF4 PIGS-213ENST00000583631 546 ntTSL 523.77■■□□□ 1.41e-13■■■■□ 19.5
SND1Q7KZF4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.13e-9■■■■□ 19.5
SND1Q7KZF4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.923e-9■■■■□ 19.5
SND1Q7KZF4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.923e-9■■■■□ 19.5
SND1Q7KZF4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.853e-9■■■■□ 19.5
SND1Q7KZF4 PIGS-212ENST00000582721 594 ntTSL 419.92■□□□□ 0.781e-13■■■■□ 19.5
SND1Q7KZF4 ID3-203ENST00000486541 892 ntTSL 1 (best)18.44■□□□□ 0.542e-8■■■■□ 19.5
SND1Q7KZF4 MSLN-206ENST00000566269 1068 ntTSL 318.3■□□□□ 0.523e-9■■■■□ 19.5
SND1Q7KZF4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.292e-8■■■■□ 19.5
SND1Q7KZF4 PIGS-215ENST00000584413 577 ntTSL 416.41■□□□□ 0.221e-13■■■■□ 19.5
SND1Q7KZF4 PIGS-208ENST00000577594 481 ntTSL 214.66□□□□□ -0.061e-13■■■■□ 19.5
SND1Q7KZF4 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.59□□□□□ -0.231e-9■■■■□ 19.5
SND1Q7KZF4 TECR-212ENST00000598333 822 ntTSL 310.49□□□□□ -0.732e-7■■■■□ 19.5
SND1Q7KZF4 CD151-211ENST00000526693 771 ntTSL 319.3■□□□□ 0.683e-7■■■■□ 19.5
SND1Q7KZF4 CD151-204ENST00000524748 793 ntTSL 519.25■□□□□ 0.673e-7■■■■□ 19.5
SND1Q7KZF4 CD151-212ENST00000527341 797 ntTSL 319.25■□□□□ 0.673e-7■■■■□ 19.5
SND1Q7KZF4 CD151-217ENST00000530320 648 ntTSL 314.57□□□□□ -0.083e-7■■■■□ 19.5
SND1Q7KZF4 SUMF2-218ENST00000529457 568 ntTSL 212.82□□□□□ -0.363e-7■■■■□ 19.5
SND1Q7KZF4 HLA-C-204ENST00000415537 782 nt25.78■■□□□ 1.723e-9■■■■□ 19.4
SND1Q7KZF4 HLA-C-209ENST00000495835 1073 nt25.01■■□□□ 1.593e-9■■■■□ 19.4
SND1Q7KZF4 SLC13A5-206ENST00000572352 538 ntTSL 415.78■□□□□ 0.126e-9■■■■□ 19.4
SND1Q7KZF4 CD164-208ENST00000506649 778 ntTSL 321.91■■□□□ 1.12e-9■■■■□ 19.4
SND1Q7KZF4 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.72□□□□□ -0.052e-9■■■■□ 19.4
SND1Q7KZF4 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC12.96□□□□□ -0.332e-9■■■■□ 19.4
SND1Q7KZF4 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.62e-9■■■■□ 19.4
SND1Q7KZF4 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC10.71□□□□□ -0.692e-9■■■■□ 19.4
SND1Q7KZF4 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC10.22□□□□□ -0.772e-9■■■■□ 19.4
SND1Q7KZF4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC7.11□□□□□ -1.272e-9■■■■□ 19.4
SND1Q7KZF4 CD164-206ENST00000499860 2845 ntTSL 1 (best)2.39□□□□□ -2.032e-9■■■■□ 19.4
SND1Q7KZF4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.62■□□□□ 0.574e-7■■■■□ 19.4
SND1Q7KZF4 LBR-206ENST00000441022 536 ntTSL 28.59□□□□□ -1.036e-10■■■■□ 19.4
SND1Q7KZF4 CR1L-202ENST00000430248 351 ntTSL 36.07□□□□□ -1.442e-6■■■■□ 19.4
SND1Q7KZF4 PHGDH-210ENST00000641115 1638 ntBASIC20.67■□□□□ 0.91e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-209ENST00000641074 1780 ntBASIC18.98■□□□□ 0.631e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.56■□□□□ 0.561e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-211ENST00000641213 2053 nt18.5■□□□□ 0.551e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-229ENST00000641891 2175 nt18.4■□□□□ 0.541e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-232ENST00000641947 1774 nt18.26■□□□□ 0.511e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.26■□□□□ 0.511e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.49■□□□□ 0.391e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-216ENST00000641375 2196 nt17.28■□□□□ 0.361e-7■■■■□ 19.4
SND1Q7KZF4 PHGDH-233ENST00000642021 2794 nt15.33■□□□□ 0.041e-7■■■■□ 19.4
SND1Q7KZF4 ANGPTL8-202ENST00000587543 432 ntTSL 1 (best)13.87□□□□□ -0.194e-16■■■■□ 19.4
SND1Q7KZF4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.07■□□□□ 0.82e-7■■■■□ 19.4
SND1Q7KZF4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.772e-7■■■■□ 19.4
SND1Q7KZF4 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.452e-7■■■■□ 19.4
SND1Q7KZF4 SEC24D-201ENST00000280551 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.76e-7■■■■□ 19.4
SND1Q7KZF4 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC12.15□□□□□ -0.463e-8■■■■□ 19.4
SND1Q7KZF4 ACSL5-207ENST00000479936 869 ntTSL 510.18□□□□□ -0.789e-8■■■■□ 19.4
SND1Q7KZF4 SARAF-203ENST00000518174 1981 ntTSL 519.68■□□□□ 0.749e-8■■■■□ 19.4
SND1Q7KZF4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC19.26■□□□□ 0.679e-8■■■■□ 19.4
SND1Q7KZF4 SARAF-205ENST00000518340 582 ntTSL 319.09■□□□□ 0.659e-8■■■■□ 19.4
SND1Q7KZF4 SARAF-206ENST00000520303 1803 ntTSL 1 (best)18.73■□□□□ 0.599e-8■■■■□ 19.4
SND1Q7KZF4 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.489e-8■■■■□ 19.4
SND1Q7KZF4 SARAF-208ENST00000521265 1741 ntTSL 513.78□□□□□ -0.29e-8■■■■□ 19.4
SND1Q7KZF4 SARAF-212ENST00000523127 735 ntTSL 57.79□□□□□ -1.169e-8■■■■□ 19.4
SND1Q7KZF4 GUSB-209ENST00000466883 2555 ntTSL 217.67■□□□□ 0.422e-11■■■■□ 19.4
SND1Q7KZF4 F10-205ENST00000477269 907 ntTSL 1 (best)14.46□□□□□ -0.094e-10■■■■□ 19.4
SND1Q7KZF4 HLA-L-211ENST00000482052 1765 ntBASIC24.16■■□□□ 1.468e-9■■■■□ 19.4
SND1Q7KZF4 HLA-L-209ENST00000420110 1011 ntBASIC21.51■■□□□ 1.038e-9■■■■□ 19.4
SND1Q7KZF4 HLA-L-210ENST00000463348 4587 nt12.21□□□□□ -0.458e-9■■■■□ 19.4
SND1Q7KZF4 ELOVL1-208ENST00000478481 564 ntTSL 215.32■□□□□ 0.044e-7■■■■□ 19.4
SND1Q7KZF4 TECR-221ENST00000600395 846 ntTSL 324.01■■□□□ 1.432e-7■■■■□ 19.4
SND1Q7KZF4 TECR-223ENST00000601350 687 ntTSL 317.66■□□□□ 0.422e-7■■■■□ 19.4
SND1Q7KZF4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.312e-7■■■■□ 19.4
SND1Q7KZF4 TECR-210ENST00000597607 1164 ntTSL 317■□□□□ 0.312e-7■■■■□ 19.4
Retrieved 100 of 13,567 protein–RNA pairs in 101.6 ms