RNA–Protein interactions for RNA: ENST00000533734.1

TCN1-204, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 293 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-204ENST00000533734 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
TCN1-204ENST00000533734 CHIC1Q5VXU3 224 aa26.33■■□□□ 1.81
TCN1-204ENST00000533734 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
TCN1-204ENST00000533734 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
TCN1-204ENST00000533734 FOXD1Q16676 465 aa21.68■■□□□ 1.06
TCN1-204ENST00000533734 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
TCN1-204ENST00000533734 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
TCN1-204ENST00000533734 ADRA2BP18089 450 aa20.41■□□□□ 0.86
TCN1-204ENST00000533734 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
TCN1-204ENST00000533734 MSH5O43196 834 aa20.22■□□□□ 0.83
TCN1-204ENST00000533734 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
TCN1-204ENST00000533734 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
TCN1-204ENST00000533734 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
TCN1-204ENST00000533734 PPP4R3CPQ6ZMV5 832 aa18.58■□□□□ 0.56
TCN1-204ENST00000533734 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
TCN1-204ENST00000533734 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
TCN1-204ENST00000533734 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
TCN1-204ENST00000533734 NCBP3Q53F19 620 aaKnown RBP17.99■□□□□ 0.47
TCN1-204ENST00000533734 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
TCN1-204ENST00000533734 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
TCN1-204ENST00000533734 DCAF8L1A6NGE4 600 aa17.69■□□□□ 0.42
TCN1-204ENST00000533734 KCNA4P22459 653 aa17.63■□□□□ 0.41
TCN1-204ENST00000533734 DNAJC5BQ9UF47 199 aa17.4■□□□□ 0.38
TCN1-204ENST00000533734 RNF39Q9H2S5 420 aa17.27■□□□□ 0.36
TCN1-204ENST00000533734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.33
TCN1-204ENST00000533734 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
TCN1-204ENST00000533734 C1QBPQ07021 282 aaKnown RBP17.05■□□□□ 0.32
TCN1-204ENST00000533734 SLC4A2P04920 1241 aa16.83■□□□□ 0.28
TCN1-204ENST00000533734 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
TCN1-204ENST00000533734 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
TCN1-204ENST00000533734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
TCN1-204ENST00000533734 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
TCN1-204ENST00000533734 SPINK5Q9NQ38 1064 aaPredicted RBP16.44■□□□□ 0.22
TCN1-204ENST00000533734 APLP2Q06481 763 aa16.43■□□□□ 0.22
TCN1-204ENST00000533734 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
TCN1-204ENST00000533734 SAMD1Q6SPF0 538 aaPredicted RBP16.4■□□□□ 0.22
TCN1-204ENST00000533734 FOXD4L1Q9NU39 408 aa16.4■□□□□ 0.22
TCN1-204ENST00000533734 CAPN15O75808 1086 aa16.39■□□□□ 0.21
TCN1-204ENST00000533734 ZNF219Q9P2Y4 722 aaPredicted RBP16.26■□□□□ 0.19
TCN1-204ENST00000533734 DSG3P32926 999 aa16.25■□□□□ 0.19
TCN1-204ENST00000533734 ZBTB22O15209 634 aa16.22■□□□□ 0.19
TCN1-204ENST00000533734 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
TCN1-204ENST00000533734 ABCB7O75027 752 aa16.02■□□□□ 0.16
TCN1-204ENST00000533734 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
TCN1-204ENST00000533734 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
TCN1-204ENST00000533734 POLA2Q14181 598 aa15.84■□□□□ 0.13
TCN1-204ENST00000533734 CSRNP3Q8WYN3 585 aa15.75■□□□□ 0.11
TCN1-204ENST00000533734 EHMT2Q96KQ7 1210 aa15.68■□□□□ 0.1
TCN1-204ENST00000533734 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
TCN1-204ENST00000533734 RBM42Q9BTD8 480 aaKnown RBP15.55■□□□□ 0.08
TCN1-204ENST00000533734 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
TCN1-204ENST00000533734 FBLN2P98095 1184 aa15.34■□□□□ 0.05
TCN1-204ENST00000533734 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
TCN1-204ENST00000533734 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
TCN1-204ENST00000533734 SPDYE2BA6NHP3 402 aa15.15■□□□□ 0.02
TCN1-204ENST00000533734 SPDYE6P0CI01 402 aa15.15■□□□□ 0.02
TCN1-204ENST00000533734 SPDYE2Q495Y8 402 aa15.15■□□□□ 0.02
TCN1-204ENST00000533734 POTEHQ6S545 545 aa15.07■□□□□ 0
TCN1-204ENST00000533734 REM2Q8IYK8 340 aaPredicted RBP15.06■□□□□ 0
TCN1-204ENST00000533734 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
TCN1-204ENST00000533734 SSUH2Q9Y2M2 353 aa15□□□□□ -0.01
TCN1-204ENST00000533734 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
TCN1-204ENST00000533734 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
TCN1-204ENST00000533734 SPDYE1Q8NFV5 336 aaPredicted RBP14.8□□□□□ -0.04
TCN1-204ENST00000533734 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
TCN1-204ENST00000533734 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
TCN1-204ENST00000533734 FXR2P51116 673 aaKnown RBP eCLIP14.73□□□□□ -0.05
TCN1-204ENST00000533734 SPDYE4A6NLX3 237 aa14.69□□□□□ -0.06
TCN1-204ENST00000533734 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
TCN1-204ENST00000533734 PRR29P0C7W0 189 aa14.52□□□□□ -0.09
TCN1-204ENST00000533734 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
TCN1-204ENST00000533734 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
TCN1-204ENST00000533734 PROM2Q8N271 834 aa14.46□□□□□ -0.09
TCN1-204ENST00000533734 CHADLQ6NUI6 762 aa14.38□□□□□ -0.11
TCN1-204ENST00000533734 HAX1O00165 279 aa14.35□□□□□ -0.11
TCN1-204ENST00000533734 SP7Q8TDD2 431 aaPredicted RBP14.29□□□□□ -0.12
TCN1-204ENST00000533734 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
TCN1-204ENST00000533734 FKBP8Q14318 412 aa14.25□□□□□ -0.13
TCN1-204ENST00000533734 CREBZFQ9NS37 354 aa14.25□□□□□ -0.13
TCN1-204ENST00000533734 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
TCN1-204ENST00000533734 EVX2Q03828 476 aa14.18□□□□□ -0.14
TCN1-204ENST00000533734 CD44P16070 742 aaKnown RBP14.07□□□□□ -0.16
TCN1-204ENST00000533734 MNX1P50219 401 aaPredicted RBP14.07□□□□□ -0.16
TCN1-204ENST00000533734 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
TCN1-204ENST00000533734 PLEKHG5O94827 1062 aa13.95□□□□□ -0.18
TCN1-204ENST00000533734 MIER1Q8N108 512 aa13.93□□□□□ -0.18
TCN1-204ENST00000533734 GABBR2O75899 941 aa13.92□□□□□ -0.18
TCN1-204ENST00000533734 ZNF579Q8NAF0 562 aaKnown RBP13.92□□□□□ -0.18
TCN1-204ENST00000533734 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
TCN1-204ENST00000533734 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
TCN1-204ENST00000533734 CLCN6P51797 869 aa13.9□□□□□ -0.18
TCN1-204ENST00000533734 ZRANB1Q9UGI0 708 aa13.9□□□□□ -0.18
TCN1-204ENST00000533734 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
TCN1-204ENST00000533734 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
TCN1-204ENST00000533734 VASPP50552 380 aaPredicted RBP13.74□□□□□ -0.21
TCN1-204ENST00000533734 PHF12Q96QT6 1004 aa13.74□□□□□ -0.21
TCN1-204ENST00000533734 RASEFQ8IZ41 740 aa13.72□□□□□ -0.21
TCN1-204ENST00000533734 TSPYL2Q9H2G4 693 aaPredicted RBP13.71□□□□□ -0.21
TCN1-204ENST00000533734 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
TCN1-204ENST00000533734 NUBP1P53384 320 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms