Protein–RNA interactions for Protein: O95801

TTC4, Tetratricopeptide repeat protein 4, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC4O95801 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC4O95801 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TTC4O95801 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TTC4O95801 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TTC4O95801 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TTC4O95801 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC4O95801 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TTC4O95801 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
TTC4O95801 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC4O95801 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC4O95801 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC4O95801 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC4O95801 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.72■■□□□ 1.07
TTC4O95801 AL138724.1-201ENST00000606771 1088 ntBASIC21.72■■□□□ 1.07
TTC4O95801 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC4O95801 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.72■■□□□ 1.07
TTC4O95801 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TTC4O95801 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
TTC4O95801 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TTC4O95801 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC4O95801 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TTC4O95801 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC4O95801 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC4O95801 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC4O95801 OXCT2P1-201ENST00000447263 1535 ntBASIC21.71■■□□□ 1.07
TTC4O95801 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TTC4O95801 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.71■■□□□ 1.07
TTC4O95801 AC010141.3-201ENST00000456659 717 ntBASIC21.71■■□□□ 1.07
TTC4O95801 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.71■■□□□ 1.07
TTC4O95801 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC4O95801 DUX4L19-201ENST00000557448 1267 ntBASIC21.71■■□□□ 1.07
TTC4O95801 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.71■■□□□ 1.07
TTC4O95801 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.71■■□□□ 1.07
TTC4O95801 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
TTC4O95801 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TTC4O95801 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TTC4O95801 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.7■■□□□ 1.07
TTC4O95801 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TTC4O95801 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC4O95801 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
TTC4O95801 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.7■■□□□ 1.06
TTC4O95801 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TTC4O95801 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC4O95801 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TTC4O95801 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC4O95801 AL356441.2-201ENST00000443009 864 ntBASIC21.7■■□□□ 1.06
TTC4O95801 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.7■■□□□ 1.06
TTC4O95801 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.7■■□□□ 1.06
TTC4O95801 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TTC4O95801 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
TTC4O95801 LINC01006-201ENST00000333319 2292 ntBASIC21.69■■□□□ 1.06
TTC4O95801 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.69■■□□□ 1.06
TTC4O95801 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TTC4O95801 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TTC4O95801 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.69■■□□□ 1.06
TTC4O95801 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TTC4O95801 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.69■■□□□ 1.06
TTC4O95801 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.68■■□□□ 1.06
TTC4O95801 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC4O95801 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC4O95801 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TTC4O95801 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC4O95801 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC4O95801 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC4O95801 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.68■■□□□ 1.06
TTC4O95801 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC4O95801 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC4O95801 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC4O95801 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.68■■□□□ 1.06
TTC4O95801 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC4O95801 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.68■■□□□ 1.06
TTC4O95801 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC4O95801 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TTC4O95801 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
TTC4O95801 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 SYT6-210ENST00000641643 1587 ntBASIC21.67■■□□□ 1.06
TTC4O95801 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TTC4O95801 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.67■■□□□ 1.06
TTC4O95801 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.67■■□□□ 1.06
TTC4O95801 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
TTC4O95801 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.67■■□□□ 1.06
TTC4O95801 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TTC4O95801 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TTC4O95801 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms