Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF103-CHMP3A0A140T963 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.34■□□□□ 0.85
RNF103-CHMP3A0A140T963 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 AC079089.2-201ENST00000531211 1277 ntBASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RNF103-CHMP3A0A140T963 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF103-CHMP3A0A140T963 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF103-CHMP3A0A140T963 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 LINC01521-201ENST00000504184 1943 ntBASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 MIR4466-201ENST00000606121 54 ntBASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC068587.7-201ENST00000641602 218 ntBASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF103-CHMP3A0A140T963 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF103-CHMP3A0A140T963 SYT6-210ENST00000641643 1587 ntBASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 Z98882.1-201ENST00000622160 2253 ntBASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RNF103-CHMP3A0A140T963 SERBP1P1-201ENST00000396021 1160 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms