Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AL499627.2-201ENST00000606283 725 ntBASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 pRNA.6-201ENST00000610482 90 ntBASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 pRNA.5-201ENST00000612139 90 ntBASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC011298.3-201ENST00000615796 283 ntBASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 pRNA.11-201ENST00000618423 90 ntBASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 pRNA.13-201ENST00000619112 90 ntBASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AL157384.1-201ENST00000445995 2473 ntBASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAV8-3A0A0A6YYJ7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms