Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 QRICH1-207ENST00000450685 426 ntTSL 24.26□□□□□ -1.732e-6■□□□□ 9.5
DDX3XO00571 HERC1-203ENST00000558532 581 ntTSL 34.1□□□□□ -1.754e-9■□□□□ 9.5
DDX3XO00571 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.66□□□□□ -1.822e-6■□□□□ 9.5
DDX3XO00571 FANCI-203ENST00000447611 3690 ntTSL 23.47□□□□□ -1.852e-6■□□□□ 9.5
DDX3XO00571 EHMT1-229ENST00000636081 100 ntTSL 53.43□□□□□ -1.862e-6■□□□□ 9.5
DDX3XO00571 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.61■□□□□ 0.094e-12■□□□□ 9.5
DDX3XO00571 BUB3-204ENST00000407911 895 ntTSL 1 (best)13.13□□□□□ -0.311e-16■□□□□ 9.4
DDX3XO00571 MARS-205ENST00000546481 561 ntTSL 323.27■■□□□ 1.324e-15■□□□□ 9.4
DDX3XO00571 MARS-226ENST00000551892 748 ntTSL 322.3■■□□□ 1.164e-15■□□□□ 9.4
DDX3XO00571 MARS-227ENST00000552007 434 ntTSL 322.3■■□□□ 1.164e-15■□□□□ 9.4
DDX3XO00571 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.12■□□□□ 0.974e-15■□□□□ 9.4
DDX3XO00571 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.12■□□□□ 0.974e-15■□□□□ 9.4
DDX3XO00571 MARS-207ENST00000547062 571 ntTSL 220.98■□□□□ 0.954e-15■□□□□ 9.4
DDX3XO00571 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.78■□□□□ 0.921e-12■□□□□ 9.4
DDX3XO00571 MARS-214ENST00000548714 567 ntTSL 220.57■□□□□ 0.884e-15■□□□□ 9.4
DDX3XO00571 MARS-232ENST00000553162 575 ntTSL 220.25■□□□□ 0.834e-15■□□□□ 9.4
DDX3XO00571 MARS-208ENST00000547501 510 ntTSL 219.84■□□□□ 0.774e-15■□□□□ 9.4
DDX3XO00571 MARS-217ENST00000549074 532 ntTSL 419.36■□□□□ 0.694e-15■□□□□ 9.4
DDX3XO00571 MARS-223ENST00000551431 559 ntTSL 419.36■□□□□ 0.694e-15■□□□□ 9.4
DDX3XO00571 MARS-225ENST00000551842 662 ntTSL 219.36■□□□□ 0.694e-15■□□□□ 9.4
DDX3XO00571 MARS-202ENST00000447721 1328 ntTSL 219.21■□□□□ 0.674e-15■□□□□ 9.4
DDX3XO00571 MARS-221ENST00000550449 739 ntTSL 318.83■□□□□ 0.64e-15■□□□□ 9.4
DDX3XO00571 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.77■□□□□ 0.284e-15■□□□□ 9.4
DDX3XO00571 MARS-204ENST00000545888 2979 ntTSL 516.08■□□□□ 0.164e-15■□□□□ 9.4
DDX3XO00571 MARS-213ENST00000548674 749 ntTSL 515.57■□□□□ 0.084e-15■□□□□ 9.4
DDX3XO00571 PECR-203ENST00000461330 812 ntTSL 215.54■□□□□ 0.081e-12■□□□□ 9.4
DDX3XO00571 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.044e-15■□□□□ 9.4
DDX3XO00571 MARS-203ENST00000537638 3592 ntTSL 214.34□□□□□ -0.114e-15■□□□□ 9.4
DDX3XO00571 MARS-210ENST00000548146 558 ntTSL 411.83□□□□□ -0.521e-12■□□□□ 9.4
DDX3XO00571 MARS-231ENST00000553123 724 ntTSL 28.27□□□□□ -1.091e-12■□□□□ 9.4
DDX3XO00571 LRPAP1-201ENST00000296325 1078 ntTSL 1 (best)17.03■□□□□ 0.322e-14■□□□□ 9.4
DDX3XO00571 UFD1-208ENST00000484101 751 ntTSL 510.39□□□□□ -0.751e-12■□□□□ 9.4
DDX3XO00571 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.25e-7■□□□□ 9.4
DDX3XO00571 UNC13D-213ENST00000590762 848 ntTSL 522.08■■□□□ 1.131e-11■□□□□ 9.4
DDX3XO00571 UNC13D-203ENST00000585574 658 ntTSL 317.72■□□□□ 0.431e-11■□□□□ 9.4
DDX3XO00571 UNC13D-210ENST00000587504 1050 ntTSL 513.63□□□□□ -0.231e-11■□□□□ 9.4
DDX3XO00571 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC8.02□□□□□ -1.131e-10■□□□□ 9.4
DDX3XO00571 TRNAU1AP-203ENST00000464093 1632 ntTSL 59.34□□□□□ -0.913e-7■□□□□ 9.4
DDX3XO00571 ENTPD6-218ENST00000490187 1918 ntTSL 216.74■□□□□ 0.272e-7■□□□□ 9.4
DDX3XO00571 ENTPD6-204ENST00000376666 2100 ntTSL 516.48■□□□□ 0.232e-7■□□□□ 9.4
DDX3XO00571 ENTPD6-217ENST00000485936 2588 ntTSL 216.29■□□□□ 0.22e-7■□□□□ 9.4
DDX3XO00571 TRAK1-207ENST00000469506 578 ntTSL 218.84■□□□□ 0.614e-15■□□□□ 9.4
DDX3XO00571 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.35■□□□□ 0.214e-15■□□□□ 9.4
DDX3XO00571 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 04e-15■□□□□ 9.4
DDX3XO00571 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.81□□□□□ -0.24e-15■□□□□ 9.4
DDX3XO00571 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.254e-15■□□□□ 9.4
DDX3XO00571 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC12.76□□□□□ -0.374e-15■□□□□ 9.4
DDX3XO00571 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC12.44□□□□□ -0.424e-15■□□□□ 9.4
DDX3XO00571 TRAK1-204ENST00000418790 489 ntTSL 411.26□□□□□ -0.614e-15■□□□□ 9.4
DDX3XO00571 HDGF-208ENST00000482651 966 ntTSL 38.99□□□□□ -0.974e-15■□□□□ 9.4
DDX3XO00571 ARPC2-210ENST00000471355 602 ntTSL 27.6□□□□□ -1.193e-6■□□□□ 9.4
DDX3XO00571 ARPC2-211ENST00000472753 503 ntTSL 33.54□□□□□ -1.843e-6■□□□□ 9.4
DDX3XO00571 RPS4X-202ENST00000373626 594 ntTSL 39.1□□□□□ -0.953e-60■□□□□ 9.4
DDX3XO00571 RPS4X-201ENST00000316084 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.963e-60■□□□□ 9.4
DDX3XO00571 ZNF267-205ENST00000566541 589 ntTSL 413.04□□□□□ -0.327e-7■□□□□ 9.4
DDX3XO00571 ZNF267-201ENST00000300870 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.717e-7■□□□□ 9.4
DDX3XO00571 ZNF267-202ENST00000394846 680 ntTSL 2 BASIC10.56□□□□□ -0.727e-7■□□□□ 9.4
DDX3XO00571 ZNF267-203ENST00000561814 563 ntTSL 48.19□□□□□ -1.17e-7■□□□□ 9.4
DDX3XO00571 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC12.38□□□□□ -0.431e-34■□□□□ 9.4
DDX3XO00571 ARHGEF40-204ENST00000555038 1796 ntTSL 1 (best)23.12■■□□□ 1.299e-7■□□□□ 9.4
DDX3XO00571 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.289e-7■□□□□ 9.4
DDX3XO00571 ARHGEF40-207ENST00000556399 4902 ntTSL 1 (best)15.93■□□□□ 0.149e-7■□□□□ 9.4
DDX3XO00571 ARHGEF40-202ENST00000553709 5204 ntTSL 1 (best)15.89■□□□□ 0.139e-7■□□□□ 9.4
DDX3XO00571 ARHGEF40-206ENST00000555232 3902 ntTSL 213.04□□□□□ -0.329e-7■□□□□ 9.4
DDX3XO00571 NUP107-205ENST00000535718 2655 ntTSL 1 (best)11.68□□□□□ -0.541e-14■□□□□ 9.4
DDX3XO00571 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.031e-14■□□□□ 9.4
DDX3XO00571 NUP107-212ENST00000540453 573 ntTSL 27.43□□□□□ -1.221e-14■□□□□ 9.4
DDX3XO00571 NUP107-204ENST00000535333 683 ntTSL 37.37□□□□□ -1.231e-14■□□□□ 9.4
DDX3XO00571 NUP107-206ENST00000537598 695 ntTSL 35.89□□□□□ -1.471e-14■□□□□ 9.4
DDX3XO00571 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.63□□□□□ -1.511e-14■□□□□ 9.4
DDX3XO00571 SFT2D1-206ENST00000494682 359 ntTSL 35.32□□□□□ -1.563e-9■□□□□ 9.4
DDX3XO00571 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.85■■□□□ 1.892e-6■□□□□ 9.4
DDX3XO00571 LMO2-206ENST00000493667 390 ntTSL 319.03■□□□□ 0.642e-6■□□□□ 9.4
DDX3XO00571 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.592e-14■□□□□ 9.4
DDX3XO00571 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.229e-23■□□□□ 9.4
DDX3XO00571 MBTD1-202ENST00000405860 3224 ntTSL 512.83□□□□□ -0.369e-23■□□□□ 9.4
DDX3XO00571 MBTD1-206ENST00000591270 2163 ntTSL 25.66□□□□□ -1.59e-23■□□□□ 9.4
DDX3XO00571 CTSD-214ENST00000637937 1262 ntTSL 517.3■□□□□ 0.361e-21■□□□□ 9.4
DDX3XO00571 AC068580.4-204ENST00000427721 1007 ntTSL 216.5■□□□□ 0.231e-21■□□□□ 9.4
DDX3XO00571 AC068580.4-202ENST00000636579 350 ntTSL 315.39■□□□□ 0.051e-21■□□□□ 9.4
DDX3XO00571 NME2-208ENST00000570801 565 ntTSL 213.84□□□□□ -0.196e-21■□□□□ 9.4
DDX3XO00571 RBBP4-205ENST00000445722 580 ntTSL 214.97□□□□□ -0.018e-16■□□□□ 9.4
DDX3XO00571 RBBP4-213ENST00000490500 632 ntTSL 312.42□□□□□ -0.428e-16■□□□□ 9.4
DDX3XO00571 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC8.3□□□□□ -1.088e-16■□□□□ 9.4
DDX3XO00571 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.12e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-201ENST00000260359 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.682e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-212ENST00000560747 2256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.872e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-205ENST00000558123 1934 ntTSL 59.07□□□□□ -0.962e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-209ENST00000559659 529 ntTSL 28.71□□□□□ -1.022e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-206ENST00000558582 546 ntTSL 58.62□□□□□ -1.032e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.032e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-207ENST00000559046 580 ntTSL 58.58□□□□□ -1.042e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC8.36□□□□□ -1.072e-42■□□□□ 9.4
DDX3XO00571 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.192e-42■□□□□ 9.4
DDX3XO00571 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.35■■■□□ 2.132e-7■□□□□ 9.4
DDX3XO00571 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.378e-8■□□□□ 9.3
DDX3XO00571 FBXO2-202ENST00000465901 434 ntTSL 322.01■■□□□ 1.118e-8■□□□□ 9.3
DDX3XO00571 UBE2B-205ENST00000506787 500 ntTSL 310.35□□□□□ -0.755e-34■□□□□ 9.3
DDX3XO00571 UBE2B-204ENST00000504431 235 ntTSL 28.34□□□□□ -1.075e-34■□□□□ 9.3
DDX3XO00571 UBE2B-206ENST00000507277 644 ntTSL 58.22□□□□□ -1.095e-34■□□□□ 9.3
Retrieved 100 of 47,714 protein–RNA pairs in 1246.2 ms