Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.888e-7■■■■□ 22.7
CSTF2TQ9H0L4 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.89□□□□□ -0.191e-6■■■■□ 22.7
CSTF2TQ9H0L4 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.391e-6■■■■□ 22.7
CSTF2TQ9H0L4 PAX8-AS1-205ENST00000437551 2390 ntTSL 5 BASIC10.63□□□□□ -0.717e-7■■■■□ 22.7
CSTF2TQ9H0L4 CTNNB1-212ENST00000471014 607 ntTSL 312.22□□□□□ -0.455e-8■■■■□ 22.7
CSTF2TQ9H0L4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.03■□□□□ 0.969e-8■■■■□ 22.7
CSTF2TQ9H0L4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.36■□□□□ 0.539e-8■■■■□ 22.7
CSTF2TQ9H0L4 USP22-204ENST00000476111 573 ntTSL 317.3■□□□□ 0.361e-9■■■■□ 22.7
CSTF2TQ9H0L4 BOP1-204ENST00000569403 651 ntTSL 424.34■■□□□ 1.498e-7■■■■□ 22.7
CSTF2TQ9H0L4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.898e-7■■■■□ 22.7
CSTF2TQ9H0L4 TAF9-206ENST00000508954 1057 ntTSL 222.5■■□□□ 1.192e-6■■■■□ 22.6
CSTF2TQ9H0L4 TAF9-207ENST00000509462 761 ntAPPRIS ALT2 TSL 222.34■■□□□ 1.172e-6■■■■□ 22.6
CSTF2TQ9H0L4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.782e-6■■■■□ 22.6
CSTF2TQ9H0L4 TAF9-203ENST00000503245 966 ntAPPRIS ALT2 TSL 519.65■□□□□ 0.742e-6■■■■□ 22.6
CSTF2TQ9H0L4 TAF9-208ENST00000512152 582 ntAPPRIS ALT2 TSL 219.32■□□□□ 0.682e-6■■■■□ 22.6
CSTF2TQ9H0L4 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.66□□□□□ -0.222e-6■■■■□ 22.6
CSTF2TQ9H0L4 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.332e-6■■■■□ 22.6
CSTF2TQ9H0L4 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.472e-6■■■■□ 22.6
CSTF2TQ9H0L4 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.572e-6■■■■□ 22.6
CSTF2TQ9H0L4 AK6-203ENST00000502819 743 ntTSL 5 BASIC7.21□□□□□ -1.262e-6■■■■□ 22.6
CSTF2TQ9H0L4 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.11□□□□□ -1.272e-6■■■■□ 22.6
CSTF2TQ9H0L4 AK6-205ENST00000618980 483 ntTSL 2 BASIC7.01□□□□□ -1.292e-6■■■■□ 22.6
CSTF2TQ9H0L4 FTCD-210ENST00000488577 447 ntTSL 318.22■□□□□ 0.513e-13■■■■□ 22.6
CSTF2TQ9H0L4 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.323e-6■■■■□ 22.6
CSTF2TQ9H0L4 RSF1-202ENST00000440064 604 ntTSL 519.01■□□□□ 0.631e-6■■■■□ 22.6
CSTF2TQ9H0L4 RSF1-206ENST00000528095 2107 ntTSL 1 (best)16.3■□□□□ 0.21e-6■■■■□ 22.6
CSTF2TQ9H0L4 RSF1-203ENST00000467567 2982 ntTSL 213.56□□□□□ -0.241e-6■■■■□ 22.6
CSTF2TQ9H0L4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.181e-6■■■■□ 22.6
CSTF2TQ9H0L4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.271e-6■■■■□ 22.6
CSTF2TQ9H0L4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.131e-6■■■■□ 22.6
CSTF2TQ9H0L4 RSF1-208ENST00000530604 520 ntTSL 216.6■□□□□ 0.251e-6■■■■□ 22.6
CSTF2TQ9H0L4 SLC38A3-208ENST00000621456 635 ntTSL 516.55■□□□□ 0.241e-6■■■■□ 22.6
CSTF2TQ9H0L4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.051e-6■■■■□ 22.6
CSTF2TQ9H0L4 SLC22A18-211ENST00000495518 588 ntTSL 215.18■□□□□ 0.021e-6■■■■□ 22.6
CSTF2TQ9H0L4 ARHGEF16-206ENST00000464620 1403 ntTSL 1 (best)14.81□□□□□ -0.041e-6■■■■□ 22.6
CSTF2TQ9H0L4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.5□□□□□ -0.251e-6■■■■□ 22.6
CSTF2TQ9H0L4 BOP1-203ENST00000569160 734 ntTSL 213.25□□□□□ -0.291e-6■■■■□ 22.6
CSTF2TQ9H0L4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.01□□□□□ -0.331e-6■■■■□ 22.6
CSTF2TQ9H0L4 CHID1-214ENST00000528534 321 ntTSL 312.52□□□□□ -0.412e-6■■■■□ 22.6
CSTF2TQ9H0L4 ARHGEF16-204ENST00000418137 576 ntTSL 411.03□□□□□ -0.641e-6■■■■□ 22.6
CSTF2TQ9H0L4 RBX1-203ENST00000476110 574 ntTSL 29.39□□□□□ -0.911e-6■■■■□ 22.6
CSTF2TQ9H0L4 CHID1-213ENST00000528521 323 ntTSL 59.08□□□□□ -0.962e-6■■■■□ 22.6
CSTF2TQ9H0L4 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC11.74□□□□□ -0.532e-6■■■■□ 22.6
CSTF2TQ9H0L4 GET4-206ENST00000464468 676 ntTSL 316.35■□□□□ 0.217e-7■■■■□ 22.6
CSTF2TQ9H0L4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.068e-7■■■■□ 22.6
CSTF2TQ9H0L4 EGLN2-208ENST00000593972 935 ntTSL 222.82■■□□□ 1.247e-10■■■■□ 22.6
CSTF2TQ9H0L4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.376e-8■■■■□ 22.6
CSTF2TQ9H0L4 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC12.02□□□□□ -0.498e-7■■■■□ 22.6
CSTF2TQ9H0L4 DIP2C-201ENST00000280886 7888 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.858e-7■■■■□ 22.6
CSTF2TQ9H0L4 NCLN-204ENST00000588428 1080 ntTSL 519.65■□□□□ 0.744e-7■■■■□ 22.6
CSTF2TQ9H0L4 TIPARP-203ENST00000473702 1770 ntTSL 219.24■□□□□ 0.674e-7■■■■□ 22.6
CSTF2TQ9H0L4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.76■□□□□ 0.434e-7■■■■□ 22.6
CSTF2TQ9H0L4 NCLN-203ENST00000587740 1210 ntTSL 1 (best)14.74□□□□□ -0.054e-7■■■■□ 22.6
CSTF2TQ9H0L4 CSNK1D-224ENST00000584672 401 ntTSL 313.59□□□□□ -0.234e-7■■■■□ 22.6
CSTF2TQ9H0L4 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.354e-7■■■■□ 22.6
CSTF2TQ9H0L4 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.384e-7■■■■□ 22.6
CSTF2TQ9H0L4 TIPARP-202ENST00000461166 4181 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.574e-7■■■■□ 22.6
CSTF2TQ9H0L4 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC10.02□□□□□ -0.814e-7■■■■□ 22.6
CSTF2TQ9H0L4 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC8.59□□□□□ -1.034e-7■■■■□ 22.6
CSTF2TQ9H0L4 LINC00958-207ENST00000534477 888 ntTSL 37.64□□□□□ -1.194e-7■■■■□ 22.6
CSTF2TQ9H0L4 LINC00958-206ENST00000532541 1124 ntTSL 37.64□□□□□ -1.194e-7■■■■□ 22.6
CSTF2TQ9H0L4 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.4□□□□□ -1.224e-7■■■■□ 22.6
CSTF2TQ9H0L4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.614e-7■■■■□ 22.6
CSTF2TQ9H0L4 LINC00958-205ENST00000531402 590 ntTSL 44.73□□□□□ -1.654e-7■■■■□ 22.6
CSTF2TQ9H0L4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.211e-6■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-203ENST00000437402 563 ntTSL 520.77■□□□□ 0.921e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-215ENST00000493074 627 ntTSL 419.59■□□□□ 0.731e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-213ENST00000482138 588 ntTSL 419.59■□□□□ 0.731e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-204ENST00000454495 603 ntTSL 319.32■□□□□ 0.681e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-206ENST00000461813 587 ntTSL 418.48■□□□□ 0.551e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-202ENST00000427201 562 ntTSL 418.48■□□□□ 0.551e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-209ENST00000473045 542 ntTSL 417.77■□□□□ 0.441e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-208ENST00000468101 574 ntTSL 416.71■□□□□ 0.271e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.221e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-210ENST00000475827 545 ntTSL 414.83□□□□□ -0.041e-8■■■■□ 22.6
CSTF2TQ9H0L4 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.781e-8■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-209ENST00000533096 547 ntTSL 412.5□□□□□ -0.412e-11■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-206ENST00000529210 607 ntTSL 411.3□□□□□ -0.62e-11■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-207ENST00000529866 729 ntTSL 210.01□□□□□ -0.812e-11■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.932e-11■■■■□ 22.6
CSTF2TQ9H0L4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.952e-11■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.052e-11■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-211ENST00000534234 1584 ntTSL 58.42□□□□□ -1.062e-11■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-210ENST00000533533 537 ntTSL 48.22□□□□□ -1.092e-11■■■■□ 22.6
CSTF2TQ9H0L4 COPB1-212ENST00000534771 576 ntTSL 41.82□□□□□ -2.122e-11■■■■□ 22.6
CSTF2TQ9H0L4 NEDD4L-223ENST00000588516 1304 ntTSL 513.05□□□□□ -0.327e-7■■■■□ 22.6
CSTF2TQ9H0L4 HIVEP1-209ENST00000627968 8924 ntTSL 5 BASIC11.7□□□□□ -0.541e-6■■■■□ 22.6
CSTF2TQ9H0L4 NEDD4L-233ENST00000591989 233 ntTSL 311.66□□□□□ -0.547e-7■■■■□ 22.6
CSTF2TQ9H0L4 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.551e-6■■■■□ 22.6
CSTF2TQ9H0L4 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.551e-6■■■■□ 22.6
CSTF2TQ9H0L4 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.04□□□□□ -1.127e-7■■■■□ 22.6
CSTF2TQ9H0L4 NEDD4L-236ENST00000592846 484 ntTSL 45.98□□□□□ -1.457e-7■■■■□ 22.6
CSTF2TQ9H0L4 NEDD4L-211ENST00000585363 241 ntTSL 55.51□□□□□ -1.537e-7■■■■□ 22.6
CSTF2TQ9H0L4 PDXK-218ENST00000498040 888 ntTSL 517.07■□□□□ 0.323e-7■■■■□ 22.5
CSTF2TQ9H0L4 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.461e-6■■■■□ 22.5
CSTF2TQ9H0L4 WDR6-203ENST00000419837 538 ntTSL 410.43□□□□□ -0.743e-9■■■■□ 22.5
CSTF2TQ9H0L4 AC024592.3-201ENST00000592091 2118 ntTSL 216.34■□□□□ 0.216e-7■■■■□ 22.5
CSTF2TQ9H0L4 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 215.76■□□□□ 0.116e-7■■■■□ 22.5
CSTF2TQ9H0L4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.76■□□□□ 0.116e-7■■■■□ 22.5
CSTF2TQ9H0L4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.87□□□□□ -0.196e-7■■■■□ 22.5
Retrieved 100 of 19,151 protein–RNA pairs in 163.7 ms