RNA–Protein interactions for RNA: ENST00000504230.2

LINC00958-201, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,558 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-201ENST00000504230 AEBP2Q6ZN18 517 aaPredicted RBP30.56■■■□□ 2.48
LINC00958-201ENST00000504230 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
LINC00958-201ENST00000504230 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
LINC00958-201ENST00000504230 PHF23Q9BUL5 403 aaPredicted RBP25.75■■□□□ 1.71
LINC00958-201ENST00000504230 NISCHQ9Y2I1 1504 aa25.65■■□□□ 1.7
LINC00958-201ENST00000504230 FOXD1Q16676 465 aa24.25■■□□□ 1.47
LINC00958-201ENST00000504230 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
LINC00958-201ENST00000504230 PPP6R1Q9UPN7 881 aa22.8■■□□□ 1.24
LINC00958-201ENST00000504230 ADRA2BP18089 450 aa22.74■■□□□ 1.23
LINC00958-201ENST00000504230 PIAS4Q8N2W9 510 aaPredicted RBP22.71■■□□□ 1.23
LINC00958-201ENST00000504230 MSH5O43196 834 aa22.67■■□□□ 1.22
LINC00958-201ENST00000504230 CCDC180Q9P1Z9 1646 aa22.62■■□□□ 1.21
LINC00958-201ENST00000504230 POTEDQ86YR6 584 aa21.79■■□□□ 1.08
LINC00958-201ENST00000504230 ABCC9O60706 1549 aa21.77■■□□□ 1.08
LINC00958-201ENST00000504230 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
LINC00958-201ENST00000504230 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
LINC00958-201ENST00000504230 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
LINC00958-201ENST00000504230 NACADO15069 1562 aa21.2■□□□□ 0.98
LINC00958-201ENST00000504230 MYO15BQ96JP2 1530 aa21.19■□□□□ 0.98
LINC00958-201ENST00000504230 RB1CC1Q8TDY2 1594 aa21.13■□□□□ 0.97
LINC00958-201ENST00000504230 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
LINC00958-201ENST00000504230 MAPK8IP2Q13387 824 aaPredicted RBP20.83■□□□□ 0.92
LINC00958-201ENST00000504230 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
LINC00958-201ENST00000504230 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
LINC00958-201ENST00000504230 UNC13AQ9UPW8 1703 aa20.59■□□□□ 0.89
LINC00958-201ENST00000504230 PPP4R3CPQ6ZMV5 832 aa20.56■□□□□ 0.88
LINC00958-201ENST00000504230 SHROOM4Q9ULL8 1493 aa20.52■□□□□ 0.87
LINC00958-201ENST00000504230 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
LINC00958-201ENST00000504230 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
LINC00958-201ENST00000504230 CNKSR2Q8WXI2 1034 aa20.15■□□□□ 0.82
LINC00958-201ENST00000504230 HOXD11P31277 338 aaPredicted RBP20.03■□□□□ 0.8
LINC00958-201ENST00000504230 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
LINC00958-201ENST00000504230 RNF216Q9NWF9 866 aaPredicted RBP19.91■□□□□ 0.78
LINC00958-201ENST00000504230 EIF4G1Q04637 1599 aaKnown RBP19.89■□□□□ 0.77
LINC00958-201ENST00000504230 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
LINC00958-201ENST00000504230 NCBP3Q53F19 620 aaKnown RBP19.85■□□□□ 0.77
LINC00958-201ENST00000504230 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
LINC00958-201ENST00000504230 DCAF8L1A6NGE4 600 aa19.8■□□□□ 0.76
LINC00958-201ENST00000504230 MROH2BQ7Z745 1585 aa19.76■□□□□ 0.75
LINC00958-201ENST00000504230 CC2D2AQ9P2K1 1620 aa19.7■□□□□ 0.74
LINC00958-201ENST00000504230 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
LINC00958-201ENST00000504230 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
LINC00958-201ENST00000504230 ATAD2BQ9ULI0 1458 aa19.61■□□□□ 0.73
LINC00958-201ENST00000504230 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
LINC00958-201ENST00000504230 DNAJC5BQ9UF47 199 aa19.59■□□□□ 0.73
LINC00958-201ENST00000504230 WIZO95785 1651 aa19.57■□□□□ 0.72
LINC00958-201ENST00000504230 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
LINC00958-201ENST00000504230 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
LINC00958-201ENST00000504230 NPM3O75607 178 aaKnown RBP19.53■□□□□ 0.72
LINC00958-201ENST00000504230 BAZ1BQ9UIG0 1483 aaKnown RBP19.5■□□□□ 0.71
LINC00958-201ENST00000504230 HMGXB3Q12766 1538 aa19.49■□□□□ 0.71
LINC00958-201ENST00000504230 TOP2AP11388 1531 aaKnown RBP19.4■□□□□ 0.7
LINC00958-201ENST00000504230 RNF39Q9H2S5 420 aa19.35■□□□□ 0.69
LINC00958-201ENST00000504230 CACNB1Q02641 598 aaPredicted RBP19.32■□□□□ 0.68
LINC00958-201ENST00000504230 KCNA4P22459 653 aa19.29■□□□□ 0.68
LINC00958-201ENST00000504230 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
LINC00958-201ENST00000504230 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
LINC00958-201ENST00000504230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.06■□□□□ 0.64
LINC00958-201ENST00000504230 CADPSQ9ULU8 1353 aa19.01■□□□□ 0.63
LINC00958-201ENST00000504230 LAMC3Q9Y6N6 1575 aa18.97■□□□□ 0.63
LINC00958-201ENST00000504230 CFTRP13569 1480 aa18.97■□□□□ 0.63
LINC00958-201ENST00000504230 NESP48681 1621 aa18.94■□□□□ 0.62
LINC00958-201ENST00000504230 PDS5BQ9NTI5 1447 aa18.86■□□□□ 0.61
LINC00958-201ENST00000504230 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
LINC00958-201ENST00000504230 FANCD2Q9BXW9 1451 aa18.79■□□□□ 0.6
LINC00958-201ENST00000504230 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
LINC00958-201ENST00000504230 CEP164Q9UPV0 1460 aa18.74■□□□□ 0.59
LINC00958-201ENST00000504230 KIF21AQ7Z4S6 1674 aa18.72■□□□□ 0.59
LINC00958-201ENST00000504230 U3KPZ7 1027 aaPredicted RBP18.67■□□□□ 0.58
LINC00958-201ENST00000504230 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
LINC00958-201ENST00000504230 SLC4A2P04920 1241 aa18.6■□□□□ 0.57
LINC00958-201ENST00000504230 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
LINC00958-201ENST00000504230 WRNQ14191 1432 aaPredicted RBP eCLIP18.58■□□□□ 0.56
LINC00958-201ENST00000504230 THOC2Q8NI27 1593 aaKnown RBP18.56■□□□□ 0.56
LINC00958-201ENST00000504230 URB2Q14146 1524 aaKnown RBP18.55■□□□□ 0.56
LINC00958-201ENST00000504230 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
LINC00958-201ENST00000504230 WDR62O43379 1518 aa18.53■□□□□ 0.56
LINC00958-201ENST00000504230 CUX1P39880 1505 aa18.52■□□□□ 0.55
LINC00958-201ENST00000504230 TOPBP1Q92547 1522 aa18.52■□□□□ 0.55
LINC00958-201ENST00000504230 TOP2BQ02880 1626 aa18.48■□□□□ 0.55
LINC00958-201ENST00000504230 SYNJ1O43426 1573 aa18.48■□□□□ 0.55
LINC00958-201ENST00000504230 BIVM-ERCC5R4GMW8 1640 aa18.46■□□□□ 0.55
LINC00958-201ENST00000504230 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
LINC00958-201ENST00000504230 FGD5Q6ZNL6 1462 aa18.41■□□□□ 0.54
LINC00958-201ENST00000504230 CUX2O14529 1486 aa18.4■□□□□ 0.54
LINC00958-201ENST00000504230 POLA1P09884 1462 aaPredicted RBP18.4■□□□□ 0.54
LINC00958-201ENST00000504230 SOGA1O94964 1423 aa18.34■□□□□ 0.53
LINC00958-201ENST00000504230 SPINK5Q9NQ38 1064 aaPredicted RBP18.34■□□□□ 0.53
LINC00958-201ENST00000504230 IFT140Q96RY7 1462 aa18.33■□□□□ 0.53
LINC00958-201ENST00000504230 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
LINC00958-201ENST00000504230 CAPN15O75808 1086 aa18.3■□□□□ 0.52
LINC00958-201ENST00000504230 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.52
LINC00958-201ENST00000504230 SLC4A1APQ9BWU0 796 aaKnown RBP18.27■□□□□ 0.52
LINC00958-201ENST00000504230 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
LINC00958-201ENST00000504230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
LINC00958-201ENST00000504230 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
LINC00958-201ENST00000504230 APLP2Q06481 763 aa18.22■□□□□ 0.51
LINC00958-201ENST00000504230 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
LINC00958-201ENST00000504230 TDRD9Q8NDG6 1382 aaKnown RBP18.19■□□□□ 0.5
LINC00958-201ENST00000504230 ZNF608Q9ULD9 1512 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms