Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRGV9Q99603 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC16.56■□□□□ 0.24
TRGV9Q99603 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRGV9Q99603 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRGV9Q99603 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRGV9Q99603 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TRGV9Q99603 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRGV9Q99603 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRGV9Q99603 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.55■□□□□ 0.24
TRGV9Q99603 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
TRGV9Q99603 SERBP1P1-201ENST00000396021 1160 ntBASIC16.55■□□□□ 0.24
TRGV9Q99603 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.55■□□□□ 0.24
TRGV9Q99603 AC003102.1-202ENST00000563394 1796 ntBASIC16.55■□□□□ 0.24
TRGV9Q99603 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
TRGV9Q99603 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRGV9Q99603 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.54■□□□□ 0.24
TRGV9Q99603 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.54■□□□□ 0.24
TRGV9Q99603 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 AL049796.1-201ENST00000565336 1766 ntBASIC16.54■□□□□ 0.24
TRGV9Q99603 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRGV9Q99603 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TRGV9Q99603 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.54■□□□□ 0.24
TRGV9Q99603 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV9Q99603 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
TRGV9Q99603 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.24
TRGV9Q99603 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV9Q99603 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV9Q99603 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 AC011298.3-201ENST00000615796 283 ntBASIC16.54■□□□□ 0.24
TRGV9Q99603 AC136469.2-201ENST00000623944 1028 ntBASIC16.54■□□□□ 0.24
TRGV9Q99603 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TRGV9Q99603 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRGV9Q99603 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV9Q99603 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.54■□□□□ 0.24
TRGV9Q99603 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRGV9Q99603 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV9Q99603 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV9Q99603 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV9Q99603 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.53■□□□□ 0.24
TRGV9Q99603 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.53■□□□□ 0.24
TRGV9Q99603 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.53■□□□□ 0.24
TRGV9Q99603 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.53■□□□□ 0.24
TRGV9Q99603 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV9Q99603 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV9Q99603 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.53■□□□□ 0.24
TRGV9Q99603 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRGV9Q99603 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV9Q99603 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC16.52■□□□□ 0.24
TRGV9Q99603 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRGV9Q99603 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV9Q99603 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.52■□□□□ 0.24
TRGV9Q99603 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV9Q99603 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRGV9Q99603 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV9Q99603 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV9Q99603 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV9Q99603 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TRGV9Q99603 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV9Q99603 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRGV9Q99603 SRR-208ENST00000576848 588 ntTSL 4 BASIC16.52■□□□□ 0.24
TRGV9Q99603 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV9Q99603 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.52■□□□□ 0.24
TRGV9Q99603 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV9Q99603 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.52■□□□□ 0.23
TRGV9Q99603 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.52■□□□□ 0.23
TRGV9Q99603 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
TRGV9Q99603 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV9Q99603 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV9Q99603 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV9Q99603 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV9Q99603 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRGV9Q99603 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms