Protein–RNA interactions for Protein: Q96FX2

DPH3, DPH3 homolog, humanhuman

Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DPH3Q96FX2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DPH3Q96FX2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DPH3Q96FX2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
DPH3Q96FX2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
DPH3Q96FX2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
DPH3Q96FX2 FP325331.1-202ENST00000623531 1380 ntBASIC14.28□□□□□ -0.12
DPH3Q96FX2 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DPH3Q96FX2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC14.27□□□□□ -0.12
DPH3Q96FX2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DPH3Q96FX2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
DPH3Q96FX2 C17orf82-201ENST00000623772 1530 ntBASIC14.27□□□□□ -0.12
DPH3Q96FX2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
DPH3Q96FX2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
DPH3Q96FX2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC14.27□□□□□ -0.12
DPH3Q96FX2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.27□□□□□ -0.12
DPH3Q96FX2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DPH3Q96FX2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DPH3Q96FX2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
DPH3Q96FX2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.27□□□□□ -0.13
DPH3Q96FX2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
DPH3Q96FX2 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.27□□□□□ -0.13
DPH3Q96FX2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
DPH3Q96FX2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
DPH3Q96FX2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
DPH3Q96FX2 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
DPH3Q96FX2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 AC135279.3-201ENST00000610945 1311 ntBASIC14.26□□□□□ -0.13
DPH3Q96FX2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 pRNA.6-201ENST00000610482 90 ntBASIC14.26□□□□□ -0.13
DPH3Q96FX2 pRNA.5-201ENST00000612139 90 ntBASIC14.26□□□□□ -0.13
DPH3Q96FX2 pRNA.11-201ENST00000618423 90 ntBASIC14.26□□□□□ -0.13
DPH3Q96FX2 pRNA.13-201ENST00000619112 90 ntBASIC14.26□□□□□ -0.13
DPH3Q96FX2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
DPH3Q96FX2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC14.26□□□□□ -0.13
DPH3Q96FX2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
DPH3Q96FX2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.25□□□□□ -0.13
DPH3Q96FX2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.25□□□□□ -0.13
DPH3Q96FX2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 AC144652.1-201ENST00000609974 1624 ntBASIC14.25□□□□□ -0.13
DPH3Q96FX2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
DPH3Q96FX2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
DPH3Q96FX2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.25□□□□□ -0.13
DPH3Q96FX2 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
DPH3Q96FX2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms