Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 BX842568.3-201ENST00000418104 571 ntBASIC20.62■□□□□ 0.89
SGO1Q5FBB7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 AC126544.1-201ENST00000580842 1059 ntBASIC20.62■□□□□ 0.89
SGO1Q5FBB7 AC008764.7-201ENST00000593779 1081 ntBASIC20.62■□□□□ 0.89
SGO1Q5FBB7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 AC104564.3-201ENST00000582367 638 ntBASIC20.61■□□□□ 0.89
SGO1Q5FBB7 AC233992.3-201ENST00000607491 485 ntBASIC20.61■□□□□ 0.89
SGO1Q5FBB7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.61■□□□□ 0.89
SGO1Q5FBB7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 PBX2P1-201ENST00000493219 1291 ntBASIC20.6■□□□□ 0.89
SGO1Q5FBB7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 AF106564.1-201ENST00000607058 2553 ntBASIC20.6■□□□□ 0.89
SGO1Q5FBB7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SGO1Q5FBB7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SGO1Q5FBB7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.58■□□□□ 0.89
SGO1Q5FBB7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.58■□□□□ 0.88
SGO1Q5FBB7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SGO1Q5FBB7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms