Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ATF4P18848 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ATF4P18848 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.66■□□□□ 0.42
ATF4P18848 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.66■□□□□ 0.42
ATF4P18848 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.66■□□□□ 0.42
ATF4P18848 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.66■□□□□ 0.42
ATF4P18848 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ATF4P18848 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.65■□□□□ 0.42
ATF4P18848 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF4P18848 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATF4P18848 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF4P18848 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF4P18848 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.65■□□□□ 0.42
ATF4P18848 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF4P18848 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATF4P18848 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.64■□□□□ 0.42
ATF4P18848 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATF4P18848 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATF4P18848 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATF4P18848 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF4P18848 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF4P18848 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF4P18848 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATF4P18848 ESRRAP2-201ENST00000418437 1549 ntBASIC17.64■□□□□ 0.41
ATF4P18848 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ATF4P18848 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.64■□□□□ 0.41
ATF4P18848 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.64■□□□□ 0.41
ATF4P18848 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.64■□□□□ 0.41
ATF4P18848 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.64■□□□□ 0.41
ATF4P18848 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.64■□□□□ 0.41
ATF4P18848 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF4P18848 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.64■□□□□ 0.41
ATF4P18848 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF4P18848 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATF4P18848 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.64■□□□□ 0.41
ATF4P18848 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ATF4P18848 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF4P18848 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.63■□□□□ 0.41
ATF4P18848 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ATF4P18848 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.63■□□□□ 0.41
ATF4P18848 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.63■□□□□ 0.41
ATF4P18848 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ATF4P18848 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.63■□□□□ 0.41
ATF4P18848 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF4P18848 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF4P18848 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
ATF4P18848 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF4P18848 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF4P18848 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATF4P18848 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.63■□□□□ 0.41
ATF4P18848 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF4P18848 AC106820.2-201ENST00000563775 3264 ntBASIC17.62■□□□□ 0.41
ATF4P18848 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF4P18848 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.62■□□□□ 0.41
ATF4P18848 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
ATF4P18848 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.62■□□□□ 0.41
ATF4P18848 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF4P18848 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF4P18848 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.62■□□□□ 0.41
ATF4P18848 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ATF4P18848 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ATF4P18848 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.62■□□□□ 0.41
ATF4P18848 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
ATF4P18848 AC092068.2-201ENST00000590491 1708 ntBASIC17.61■□□□□ 0.41
ATF4P18848 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
ATF4P18848 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ATF4P18848 AL592295.1-201ENST00000400984 884 ntBASIC17.61■□□□□ 0.41
ATF4P18848 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.61■□□□□ 0.41
ATF4P18848 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ATF4P18848 MIR6765-201ENST00000614092 87 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms