Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3D1O14617 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
AP3D1O14617 AC096631.2-201ENST00000436136 790 ntBASIC19.82■□□□□ 0.76
AP3D1O14617 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3D1O14617 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3D1O14617 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP3D1O14617 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3D1O14617 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.82■□□□□ 0.76
AP3D1O14617 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP3D1O14617 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.81■□□□□ 0.76
AP3D1O14617 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
AP3D1O14617 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.81■□□□□ 0.76
AP3D1O14617 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.81■□□□□ 0.76
AP3D1O14617 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.81■□□□□ 0.76
AP3D1O14617 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.81■□□□□ 0.76
AP3D1O14617 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.81■□□□□ 0.76
AP3D1O14617 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP3D1O14617 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.81■□□□□ 0.76
AP3D1O14617 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP3D1O14617 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3D1O14617 AC026310.3-201ENST00000625186 2373 ntBASIC19.8■□□□□ 0.76
AP3D1O14617 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
AP3D1O14617 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.8■□□□□ 0.76
AP3D1O14617 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.8■□□□□ 0.76
AP3D1O14617 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP3D1O14617 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP3D1O14617 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.8■□□□□ 0.76
AP3D1O14617 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
AP3D1O14617 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
AP3D1O14617 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
AP3D1O14617 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.8■□□□□ 0.76
AP3D1O14617 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
AP3D1O14617 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.8■□□□□ 0.76
AP3D1O14617 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
AP3D1O14617 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.79■□□□□ 0.76
AP3D1O14617 AC135279.3-201ENST00000610945 1311 ntBASIC19.79■□□□□ 0.76
AP3D1O14617 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3D1O14617 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3D1O14617 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3D1O14617 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP3D1O14617 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.79■□□□□ 0.76
AP3D1O14617 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
AP3D1O14617 AC010141.3-201ENST00000456659 717 ntBASIC19.79■□□□□ 0.76
AP3D1O14617 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.79■□□□□ 0.76
AP3D1O14617 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3D1O14617 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
AP3D1O14617 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
AP3D1O14617 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3D1O14617 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.78■□□□□ 0.76
AP3D1O14617 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3D1O14617 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.78■□□□□ 0.76
AP3D1O14617 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
AP3D1O14617 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3D1O14617 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3D1O14617 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.78■□□□□ 0.76
AP3D1O14617 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.78■□□□□ 0.76
AP3D1O14617 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3D1O14617 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3D1O14617 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3D1O14617 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3D1O14617 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
AP3D1O14617 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
AP3D1O14617 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.77■□□□□ 0.76
AP3D1O14617 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.77■□□□□ 0.76
AP3D1O14617 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.77■□□□□ 0.76
AP3D1O14617 AC092667.1-201ENST00000434301 2586 ntBASIC19.77■□□□□ 0.76
AP3D1O14617 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
AP3D1O14617 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.77■□□□□ 0.76
AP3D1O14617 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP3D1O14617 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3D1O14617 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3D1O14617 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.77■□□□□ 0.75
AP3D1O14617 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
AP3D1O14617 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP3D1O14617 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.76■□□□□ 0.75
AP3D1O14617 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3D1O14617 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3D1O14617 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3D1O14617 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.76■□□□□ 0.75
AP3D1O14617 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
AP3D1O14617 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.76■□□□□ 0.75
AP3D1O14617 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
AP3D1O14617 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP3D1O14617 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms