Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.8■□□□□ 0.6
NLKQ9UBE8 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.8■□□□□ 0.6
NLKQ9UBE8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLKQ9UBE8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NLKQ9UBE8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.8■□□□□ 0.6
NLKQ9UBE8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NLKQ9UBE8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
NLKQ9UBE8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
NLKQ9UBE8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.79■□□□□ 0.6
NLKQ9UBE8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NLKQ9UBE8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.79■□□□□ 0.6
NLKQ9UBE8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
NLKQ9UBE8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 C17orf82-201ENST00000623772 1530 ntBASIC18.79■□□□□ 0.6
NLKQ9UBE8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 LINC01006-201ENST00000333319 2292 ntBASIC18.79■□□□□ 0.6
NLKQ9UBE8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NLKQ9UBE8 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
NLKQ9UBE8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
NLKQ9UBE8 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.78■□□□□ 0.6
NLKQ9UBE8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NLKQ9UBE8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 FP325331.1-202ENST00000623531 1380 ntBASIC18.78■□□□□ 0.6
NLKQ9UBE8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NLKQ9UBE8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLKQ9UBE8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLKQ9UBE8 LINC01529-204ENST00000636474 1715 ntBASIC18.77■□□□□ 0.6
NLKQ9UBE8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLKQ9UBE8 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
NLKQ9UBE8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.77■□□□□ 0.6
NLKQ9UBE8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.77■□□□□ 0.6
NLKQ9UBE8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.77■□□□□ 0.6
NLKQ9UBE8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.77■□□□□ 0.6
NLKQ9UBE8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.77■□□□□ 0.6
NLKQ9UBE8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NLKQ9UBE8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NLKQ9UBE8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
NLKQ9UBE8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NLKQ9UBE8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NLKQ9UBE8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
NLKQ9UBE8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NLKQ9UBE8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NLKQ9UBE8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NLKQ9UBE8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
NLKQ9UBE8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NLKQ9UBE8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLKQ9UBE8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLKQ9UBE8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLKQ9UBE8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NLKQ9UBE8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLKQ9UBE8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.75■□□□□ 0.59
NLKQ9UBE8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLKQ9UBE8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NLKQ9UBE8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NLKQ9UBE8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms