Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
FOXR2Q6PJQ5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
FOXR2Q6PJQ5 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.33■■□□□ 1.33
FOXR2Q6PJQ5 AC099791.1-201ENST00000416440 715 ntBASIC23.33■■□□□ 1.33
FOXR2Q6PJQ5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
FOXR2Q6PJQ5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.33■■□□□ 1.32
FOXR2Q6PJQ5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
FOXR2Q6PJQ5 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 AC055733.4-201ENST00000638462 1354 ntBASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 MIR939-201ENST00000401314 82 ntBASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 PBX2P1-201ENST00000493219 1291 ntBASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 AC008764.7-201ENST00000593779 1081 ntBASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 AL355001.2-201ENST00000620617 1191 ntBASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
FOXR2Q6PJQ5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 RASA4CP-201ENST00000424092 1398 ntBASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
FOXR2Q6PJQ5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 MIR572-201ENST00000384983 95 ntBASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 AL031432.3-201ENST00000607698 485 ntBASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 AC110285.6-201ENST00000617652 491 ntBASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
FOXR2Q6PJQ5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 AC091305.1-201ENST00000479476 895 ntBASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
FOXR2Q6PJQ5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 AC005229.4-201ENST00000610085 2198 ntBASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 TSPY26P-201ENST00000476365 1326 ntBASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
FOXR2Q6PJQ5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 AC105233.4-201ENST00000642045 216 ntBASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.27■■□□□ 1.32
FOXR2Q6PJQ5 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms