Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC9.05□□□□□ -0.966e-7■■■□□ 18.2
SRSF1Q07955 TFR2-204ENST00000462090 1844 ntTSL 514.35□□□□□ -0.112e-7■■■□□ 18.1
SRSF1Q07955 TFR2-213ENST00000490084 2196 ntTSL 212.88□□□□□ -0.352e-7■■■□□ 18.1
SRSF1Q07955 SRSF1-206ENST00000583741 1465 ntTSL 520.43■□□□□ 0.861e-10■■■□□ 18.1
SRSF1Q07955 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.14■□□□□ 0.331e-10■■■□□ 18.1
SRSF1Q07955 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.9■□□□□ 0.31e-10■■■□□ 18.1
SRSF1Q07955 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.071e-10■■■□□ 18.1
SRSF1Q07955 SRSF1-204ENST00000581979 1720 ntTSL 1 (best)11.49□□□□□ -0.571e-10■■■□□ 18.1
SRSF1Q07955 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC10.37□□□□□ -0.751e-10■■■□□ 18.1
SRSF1Q07955 SRSF1-207ENST00000584668 758 ntTSL 38.68□□□□□ -1.021e-10■■■□□ 18.1
SRSF1Q07955 LDLR-211ENST00000560173 389 ntTSL 38.84□□□□□ -0.991e-6■■■□□ 18.1
SRSF1Q07955 GOLPH3-202ENST00000503610 1074 ntTSL 331.04■■■□□ 2.562e-9■■■□□ 18.1
SRSF1Q07955 GOLPH3-203ENST00000512668 665 ntTSL 320.9■□□□□ 0.942e-9■■■□□ 18.1
SRSF1Q07955 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.092e-9■■■□□ 18.1
SRSF1Q07955 LZTR1-203ENST00000415354 648 ntTSL 311.55□□□□□ -0.565e-12■■■□□ 18.1
SRSF1Q07955 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.86e-6■■■□□ 18.1
SRSF1Q07955 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.9■□□□□ 0.781e-10■■■□□ 18.1
SRSF1Q07955 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.47■□□□□ 0.716e-6■■■□□ 18.1
SRSF1Q07955 PEX26-204ENST00000474897 2082 ntTSL 515.5■□□□□ 0.076e-6■■■□□ 18.1
SRSF1Q07955 ANKZF1-225ENST00000494886 588 ntTSL 414.86□□□□□ -0.035e-6■■■□□ 18.1
SRSF1Q07955 B3GNTL1-205ENST00000571394 774 ntTSL 314.83□□□□□ -0.046e-6■■■□□ 18.1
SRSF1Q07955 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.136e-6■■■□□ 18.1
SRSF1Q07955 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.336e-6■■■□□ 18.1
SRSF1Q07955 B3GNTL1-208ENST00000572977 2446 ntTSL 212.61□□□□□ -0.396e-6■■■□□ 18.1
SRSF1Q07955 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.46e-6■■■□□ 18.1
SRSF1Q07955 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.35□□□□□ -0.436e-6■■■□□ 18.1
SRSF1Q07955 TCF25-226ENST00000640279 2688 ntTSL 512.17□□□□□ -0.461e-7■■■□□ 18.1
SRSF1Q07955 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.486e-6■■■□□ 18.1
SRSF1Q07955 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.546e-6■■■□□ 18.1
SRSF1Q07955 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.63□□□□□ -0.556e-6■■■□□ 18.1
SRSF1Q07955 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.636e-6■■■□□ 18.1
SRSF1Q07955 B3GNTL1-202ENST00000570947 390 ntTSL 310.64□□□□□ -0.716e-6■■■□□ 18.1
SRSF1Q07955 WASHC2A-205ENST00000434114 3287 ntTSL 510.27□□□□□ -0.776e-6■■■□□ 18.1
SRSF1Q07955 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.836e-6■■■□□ 18.1
SRSF1Q07955 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.686e-6■■■□□ 18.1
SRSF1Q07955 MSH5-216ENST00000484309 857 ntTSL 511.52□□□□□ -0.578e-9■■■□□ 18.1
SRSF1Q07955 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.49■□□□□ 0.393e-6■■■□□ 18.1
SRSF1Q07955 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.73■□□□□ 0.273e-6■■■□□ 18.1
SRSF1Q07955 APBB3-212ENST00000506289 943 ntTSL 516.31■□□□□ 0.23e-6■■■□□ 18.1
SRSF1Q07955 APBB3-219ENST00000511896 2032 ntTSL 215.35■□□□□ 0.053e-6■■■□□ 18.1
SRSF1Q07955 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.033e-6■■■□□ 18.1
SRSF1Q07955 APBB3-220ENST00000513507 723 ntTSL 314.88□□□□□ -0.033e-6■■■□□ 18.1
SRSF1Q07955 APBB3-210ENST00000505617 573 ntTSL 414.66□□□□□ -0.063e-6■■■□□ 18.1
SRSF1Q07955 APBB3-214ENST00000509914 2020 ntTSL 1 (best)13.71□□□□□ -0.223e-6■■■□□ 18.1
SRSF1Q07955 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.273e-6■■■□□ 18.1
SRSF1Q07955 APBB3-206ENST00000467078 1920 ntTSL 1 (best)12.76□□□□□ -0.373e-6■■■□□ 18.1
SRSF1Q07955 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.62□□□□□ -0.393e-6■■■□□ 18.1
SRSF1Q07955 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.3□□□□□ -0.443e-6■■■□□ 18.1
SRSF1Q07955 APBB3-215ENST00000510241 2801 ntTSL 212.22□□□□□ -0.453e-6■■■□□ 18.1
SRSF1Q07955 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.031e-6■■■□□ 18.1
SRSF1Q07955 TAF15-203ENST00000603393 1214 ntTSL 1 (best)14.85□□□□□ -0.031e-6■■■□□ 18.1
SRSF1Q07955 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.071e-6■■■□□ 18.1
SRSF1Q07955 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.31e-6■■■□□ 18.1
SRSF1Q07955 TAF15-213ENST00000605197 760 ntTSL 210.96□□□□□ -0.651e-6■■■□□ 18.1
SRSF1Q07955 TAF15-212ENST00000604879 808 ntTSL 510.96□□□□□ -0.651e-6■■■□□ 18.1
SRSF1Q07955 TAF15-201ENST00000603067 580 ntTSL 56.15□□□□□ -1.421e-6■■■□□ 18.1
SRSF1Q07955 PILRB-204ENST00000438028 1822 ntTSL 1 (best)17.13■□□□□ 0.338e-8■■■□□ 18.1
SRSF1Q07955 PILRB-206ENST00000443526 1364 ntTSL 1 (best)15.9■□□□□ 0.148e-8■■■□□ 18.1
SRSF1Q07955 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.71■□□□□ 0.18e-8■■■□□ 18.1
SRSF1Q07955 PILRB-202ENST00000422808 1599 ntTSL 1 (best)15.59■□□□□ 0.098e-8■■■□□ 18.1
SRSF1Q07955 PILRB-201ENST00000419749 1506 ntTSL 1 (best)15.14■□□□□ 0.018e-8■■■□□ 18.1
SRSF1Q07955 PILRB-210ENST00000457519 2074 ntTSL 1 (best)14.22□□□□□ -0.138e-8■■■□□ 18.1
SRSF1Q07955 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.268e-8■■■□□ 18.1
SRSF1Q07955 STAG3L5P-PVRIG2P-PILRB-202ENST00000444874 2661 ntTSL 210.81□□□□□ -0.687e-8■■■□□ 18.1
SRSF1Q07955 STAG3L5P-PVRIG2P-PILRB-201ENST00000310771 3634 ntTSL 2 BASIC8.53□□□□□ -1.047e-8■■■□□ 18.1
SRSF1Q07955 FDFT1-217ENST00000530337 741 ntTSL 317.66■□□□□ 0.423e-7■■■□□ 18
SRSF1Q07955 FDFT1-215ENST00000529464 932 ntTSL 1 (best)13.93□□□□□ -0.183e-7■■■□□ 18
SRSF1Q07955 FDFT1-204ENST00000525283 898 ntTSL 312.44□□□□□ -0.423e-7■■■□□ 18
SRSF1Q07955 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.028e-8■■■□□ 18
SRSF1Q07955 DHX15-202ENST00000503562 727 ntTSL 24.29□□□□□ -1.728e-8■■■□□ 18
SRSF1Q07955 PUS7-204ENST00000481939 2436 ntTSL 514.16□□□□□ -0.142e-13■■■□□ 18
SRSF1Q07955 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.462e-13■■■□□ 18
SRSF1Q07955 PUS7-201ENST00000356362 3480 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.052e-13■■■□□ 18
SRSF1Q07955 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.591e-6■■■□□ 18
SRSF1Q07955 DDX55-206ENST00000539934 2240 ntTSL 511.11□□□□□ -0.633e-8■■■□□ 18
SRSF1Q07955 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.61□□□□□ -0.394e-7■■■□□ 18
SRSF1Q07955 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC9.85□□□□□ -0.834e-7■■■□□ 18
SRSF1Q07955 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.639e-7■■■□□ 18
SRSF1Q07955 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.669e-7■■■□□ 18
SRSF1Q07955 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.79e-7■■■□□ 18
SRSF1Q07955 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.819e-7■■■□□ 18
SRSF1Q07955 PPP6R2-201ENST00000216061 3415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.989e-7■■■□□ 18
SRSF1Q07955 OGT-204ENST00000455587 632 ntTSL 39.41□□□□□ -0.94e-9■■■□□ 18
SRSF1Q07955 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.44e-9■■■□□ 18
SRSF1Q07955 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.564e-9■■■□□ 18
SRSF1Q07955 OGT-210ENST00000488174 7243 ntTSL 55.15□□□□□ -1.584e-9■■■□□ 18
SRSF1Q07955 TCIRG1-216ENST00000534673 848 ntTSL 319.32■□□□□ 0.681e-6■■■□□ 18
SRSF1Q07955 TCIRG1-202ENST00000524598 940 ntTSL 518.13■□□□□ 0.491e-6■■■□□ 18
SRSF1Q07955 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.231e-6■■■□□ 18
SRSF1Q07955 ANP32A-201ENST00000267918 1084 ntTSL 313.93□□□□□ -0.186e-15■■■□□ 18
SRSF1Q07955 ANP32A-202ENST00000409628 2001 ntTSL 513.29□□□□□ -0.286e-15■■■□□ 18
SRSF1Q07955 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.296e-15■■■□□ 18
SRSF1Q07955 ANP32A-206ENST00000483551 3711 ntTSL 57.03□□□□□ -1.286e-15■■■□□ 18
SRSF1Q07955 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.481e-6■■■□□ 18
SRSF1Q07955 PDXDC1-207ENST00000562119 884 ntTSL 520.71■□□□□ 0.916e-7■■■□□ 17.9
SRSF1Q07955 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.54■□□□□ 0.46e-7■■■□□ 17.9
SRSF1Q07955 VHL-203ENST00000477538 958 ntTSL 1 (best)14.17□□□□□ -0.144e-8■■■□□ 17.9
SRSF1Q07955 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC11.36□□□□□ -0.596e-7■■■□□ 17.9
SRSF1Q07955 PDXDC1-216ENST00000569715 3775 ntTSL 1 (best) BASIC9.03□□□□□ -0.966e-7■■■□□ 17.9
SRSF1Q07955 PDXDC1-217ENST00000570001 4828 ntTSL 28.92□□□□□ -0.986e-7■■■□□ 17.9
Retrieved 100 of 14,836 protein–RNA pairs in 123.3 ms