RNA–Protein interactions for RNA: ENST00000510241.5

APBB3-215, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-215ENST00000510241 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
APBB3-215ENST00000510241 SHROOM4Q9ULL8 1493 aa27.93■■■□□ 2.06
APBB3-215ENST00000510241 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
APBB3-215ENST00000510241 PPARGC1BQ86YN6 1023 aaKnown RBP26.99■■□□□ 1.91
APBB3-215ENST00000510241 PCGF6Q9BYE7 350 aa26.98■■□□□ 1.91
APBB3-215ENST00000510241 HRCP23327 699 aa26.94■■□□□ 1.9
APBB3-215ENST00000510241 MYO15BQ96JP2 1530 aa26.86■■□□□ 1.89
APBB3-215ENST00000510241 DCAF8L2P0C7V8 631 aa26.73■■□□□ 1.87
APBB3-215ENST00000510241 CHIC1Q5VXU3 224 aa26.72■■□□□ 1.87
APBB3-215ENST00000510241 LOC105371045A0A1W2PR82 267 aa26.47■■□□□ 1.83
APBB3-215ENST00000510241 ZCCHC6Q5VYS8 1495 aaKnown RBP26.06■■□□□ 1.76
APBB3-215ENST00000510241 EHMT2Q96KQ7 1210 aa25.99■■□□□ 1.75
APBB3-215ENST00000510241 TRIM26Q12899 539 aaPredicted RBP25.75■■□□□ 1.71
APBB3-215ENST00000510241 FAM9AQ8IZU1 332 aaPredicted RBP25.74■■□□□ 1.71
APBB3-215ENST00000510241 DCAF1Q9Y4B6 1507 aa25.65■■□□□ 1.7
APBB3-215ENST00000510241 SCAF1Q9H7N4 1312 aaKnown RBP25.53■■□□□ 1.68
APBB3-215ENST00000510241 TRIM41Q8WV44 630 aa25.32■■□□□ 1.64
APBB3-215ENST00000510241 CCDC180Q9P1Z9 1646 aa25.28■■□□□ 1.64
APBB3-215ENST00000510241 TTBK1Q5TCY1 1321 aaPredicted RBP25.2■■□□□ 1.63
APBB3-215ENST00000510241 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.16■■□□□ 1.62
APBB3-215ENST00000510241 ZEB1P37275 1124 aaPredicted RBP25.14■■□□□ 1.61
APBB3-215ENST00000510241 NEUROD1Q13562 356 aa25■■□□□ 1.59
APBB3-215ENST00000510241 PELP1Q8IZL8 1130 aaKnown RBP24.98■■□□□ 1.59
APBB3-215ENST00000510241 CCER1Q8TC90 406 aaPredicted RBP24.92■■□□□ 1.58
APBB3-215ENST00000510241 RSF1Q96T23 1441 aaPredicted RBP24.86■■□□□ 1.57
APBB3-215ENST00000510241 GTF3C3Q9Y5Q9 886 aa24.82■■□□□ 1.56
APBB3-215ENST00000510241 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
APBB3-215ENST00000510241 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
APBB3-215ENST00000510241 SCRIBQ14160 1630 aa24.74■■□□□ 1.55
APBB3-215ENST00000510241 DIEXFQ68CQ4 756 aaKnown RBP24.69■■□□□ 1.54
APBB3-215ENST00000510241 YTHDC1Q96MU7 727 aaKnown RBP24.67■■□□□ 1.54
APBB3-215ENST00000510241 ABCC9O60706 1549 aa24.67■■□□□ 1.54
APBB3-215ENST00000510241 CECR2Q9BXF3 1484 aa24.47■■□□□ 1.51
APBB3-215ENST00000510241 CENPBP07199 599 aaPredicted RBP24.42■■□□□ 1.5
APBB3-215ENST00000510241 MROH2BQ7Z745 1585 aa24.26■■□□□ 1.47
APBB3-215ENST00000510241 HNRNPUL2Q1KMD3 747 aaKnown RBP24.23■■□□□ 1.47
APBB3-215ENST00000510241 MIER1Q8N108 512 aa24.22■■□□□ 1.47
APBB3-215ENST00000510241 UBTFP17480 764 aaKnown RBP24.19■■□□□ 1.46
APBB3-215ENST00000510241 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
APBB3-215ENST00000510241 WIZO95785 1651 aa24.17■■□□□ 1.46
APBB3-215ENST00000510241 ZNF316A6NFI3 1004 aaPredicted RBP24.16■■□□□ 1.46
APBB3-215ENST00000510241 ABCC8Q09428 1581 aa24.09■■□□□ 1.45
APBB3-215ENST00000510241 CCDC88BA6NC98 1476 aa24.06■■□□□ 1.44
APBB3-215ENST00000510241 SOGA1O94964 1423 aa24.04■■□□□ 1.44
APBB3-215ENST00000510241 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
APBB3-215ENST00000510241 RUSC2Q8N2Y8 1516 aa23.97■■□□□ 1.43
APBB3-215ENST00000510241 CSRNP3Q8WYN3 585 aa23.85■■□□□ 1.41
APBB3-215ENST00000510241 WRNQ14191 1432 aaPredicted RBP eCLIP23.75■■□□□ 1.39
APBB3-215ENST00000510241 TNIKQ9UKE5 1360 aa23.71■■□□□ 1.39
APBB3-215ENST00000510241 MYT1Q01538 1121 aa23.68■■□□□ 1.38
APBB3-215ENST00000510241 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
APBB3-215ENST00000510241 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
APBB3-215ENST00000510241 APLP2Q06481 763 aa23.57■■□□□ 1.36
APBB3-215ENST00000510241 KCNH8Q96L42 1107 aa23.57■■□□□ 1.36
APBB3-215ENST00000510241 SUPT16HQ9Y5B9 1047 aaKnown RBP23.56■■□□□ 1.36
APBB3-215ENST00000510241 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
APBB3-215ENST00000510241 BCANQ96GW7 911 aa23.55■■□□□ 1.36
APBB3-215ENST00000510241 ITGAEP38570 1179 aa23.52■■□□□ 1.36
APBB3-215ENST00000510241 NACADO15069 1562 aa23.46■■□□□ 1.35
APBB3-215ENST00000510241 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
APBB3-215ENST00000510241 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
APBB3-215ENST00000510241 CLIP1P30622 1438 aa23.44■■□□□ 1.34
APBB3-215ENST00000510241 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
APBB3-215ENST00000510241 TSHZ2Q9NRE2 1034 aa23.38■■□□□ 1.33
APBB3-215ENST00000510241 KANK4Q5T7N3 995 aaPredicted RBP23.36■■□□□ 1.33
APBB3-215ENST00000510241 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
APBB3-215ENST00000510241 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
APBB3-215ENST00000510241 HIRIP3Q9BW71 556 aaPredicted RBP23.28■■□□□ 1.32
APBB3-215ENST00000510241 DHX57Q6P158 1386 aaKnown RBP23.26■■□□□ 1.31
APBB3-215ENST00000510241 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
APBB3-215ENST00000510241 EEA1Q15075 1411 aa23.24■■□□□ 1.31
APBB3-215ENST00000510241 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
APBB3-215ENST00000510241 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
APBB3-215ENST00000510241 FKBP8Q14318 412 aa23.17■■□□□ 1.3
APBB3-215ENST00000510241 DDX10Q13206 875 aaKnown RBP23.14■■□□□ 1.3
APBB3-215ENST00000510241 ANP32EQ9BTT0 268 aa23.11■■□□□ 1.29
APBB3-215ENST00000510241 KIF21BO75037 1637 aa23.09■■□□□ 1.29
APBB3-215ENST00000510241 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
APBB3-215ENST00000510241 SIN3AQ96ST3 1273 aa23.06■■□□□ 1.28
APBB3-215ENST00000510241 BCL11AQ9H165 835 aa22.97■■□□□ 1.27
APBB3-215ENST00000510241 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
APBB3-215ENST00000510241 IRX6P78412 446 aaPredicted RBP22.91■■□□□ 1.26
APBB3-215ENST00000510241 ARAP1Q96P48 1450 aa22.89■■□□□ 1.25
APBB3-215ENST00000510241 UNC13AQ9UPW8 1703 aa22.87■■□□□ 1.25
APBB3-215ENST00000510241 FAM50AQ14320 339 aaKnown RBP22.87■■□□□ 1.25
APBB3-215ENST00000510241 RBM19Q9Y4C8 960 aaKnown RBP22.87■■□□□ 1.25
APBB3-215ENST00000510241 P3H3Q8IVL6 736 aa22.86■■□□□ 1.25
APBB3-215ENST00000510241 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
APBB3-215ENST00000510241 RAB3GAP2Q9H2M9 1393 aa22.84■■□□□ 1.25
APBB3-215ENST00000510241 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
APBB3-215ENST00000510241 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
APBB3-215ENST00000510241 NEFLP07196 543 aa22.76■■□□□ 1.23
APBB3-215ENST00000510241 MSH5O43196 834 aa22.72■■□□□ 1.23
APBB3-215ENST00000510241 WDR97A6NE52 1622 aa22.72■■□□□ 1.23
APBB3-215ENST00000510241 RRBP1Q9P2E9 1410 aaKnown RBP22.69■■□□□ 1.22
APBB3-215ENST00000510241 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
APBB3-215ENST00000510241 PPP1R15AO75807 674 aaPredicted RBP22.67■■□□□ 1.22
APBB3-215ENST00000510241 MAPKBP1O60336 1514 aa22.67■■□□□ 1.22
APBB3-215ENST00000510241 PRXQ9BXM0 1461 aa22.63■■□□□ 1.21
APBB3-215ENST00000510241 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms