Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC104564.3-201ENST00000582367 638 ntBASIC20.54■□□□□ 0.88
HMGCS1Q01581 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HMGCS1Q01581 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
HMGCS1Q01581 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
HMGCS1Q01581 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 AC024257.2-201ENST00000549699 147 ntBASIC20.53■□□□□ 0.88
HMGCS1Q01581 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 FEM1AP4-201ENST00000443167 1987 ntBASIC20.53■□□□□ 0.88
HMGCS1Q01581 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HMGCS1Q01581 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HMGCS1Q01581 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCS1Q01581 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCS1Q01581 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCS1Q01581 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCS1Q01581 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGCS1Q01581 AL136162.1-201ENST00000607711 1078 ntBASIC20.52■□□□□ 0.88
HMGCS1Q01581 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCS1Q01581 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
HMGCS1Q01581 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HMGCS1Q01581 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.52■□□□□ 0.88
HMGCS1Q01581 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.52■□□□□ 0.88
HMGCS1Q01581 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCS1Q01581 BX842568.3-201ENST00000418104 571 ntBASIC20.51■□□□□ 0.87
HMGCS1Q01581 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCS1Q01581 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCS1Q01581 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCS1Q01581 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HMGCS1Q01581 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.51■□□□□ 0.87
HMGCS1Q01581 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.5■□□□□ 0.87
HMGCS1Q01581 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGCS1Q01581 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HMGCS1Q01581 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.5■□□□□ 0.87
HMGCS1Q01581 AL034346.1-201ENST00000568244 1277 ntBASIC20.5■□□□□ 0.87
HMGCS1Q01581 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HMGCS1Q01581 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.5■□□□□ 0.87
HMGCS1Q01581 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCS1Q01581 AC003102.1-202ENST00000563394 1796 ntBASIC20.49■□□□□ 0.87
HMGCS1Q01581 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCS1Q01581 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.49■□□□□ 0.87
HMGCS1Q01581 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCS1Q01581 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCS1Q01581 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HMGCS1Q01581 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
HMGCS1Q01581 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.49■□□□□ 0.87
HMGCS1Q01581 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
HMGCS1Q01581 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCS1Q01581 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCS1Q01581 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HMGCS1Q01581 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.48■□□□□ 0.87
HMGCS1Q01581 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.48■□□□□ 0.87
HMGCS1Q01581 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
HMGCS1Q01581 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.48■□□□□ 0.87
HMGCS1Q01581 AC135279.3-201ENST00000610945 1311 ntBASIC20.48■□□□□ 0.87
HMGCS1Q01581 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HMGCS1Q01581 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
HMGCS1Q01581 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HMGCS1Q01581 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HMGCS1Q01581 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms