Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.84■□□□□ 0.61
SRP9P49458 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SRP9P49458 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.84■□□□□ 0.61
SRP9P49458 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRP9P49458 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.83■□□□□ 0.61
SRP9P49458 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRP9P49458 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
SRP9P49458 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRP9P49458 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.83■□□□□ 0.61
SRP9P49458 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SRP9P49458 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SRP9P49458 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SRP9P49458 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SRP9P49458 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.83■□□□□ 0.6
SRP9P49458 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.83■□□□□ 0.6
SRP9P49458 AL136162.1-201ENST00000607711 1078 ntBASIC18.83■□□□□ 0.6
SRP9P49458 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRP9P49458 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.83■□□□□ 0.6
SRP9P49458 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SRP9P49458 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRP9P49458 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRP9P49458 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.82■□□□□ 0.6
SRP9P49458 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SRP9P49458 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.82■□□□□ 0.6
SRP9P49458 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.82■□□□□ 0.6
SRP9P49458 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRP9P49458 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SRP9P49458 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRP9P49458 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRP9P49458 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SRP9P49458 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SRP9P49458 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 AC135279.3-201ENST00000610945 1311 ntBASIC18.81■□□□□ 0.6
SRP9P49458 AC133637.1-201ENST00000624115 1537 ntBASIC18.81■□□□□ 0.6
SRP9P49458 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SRP9P49458 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.81■□□□□ 0.6
SRP9P49458 AF106564.1-201ENST00000607058 2553 ntBASIC18.81■□□□□ 0.6
SRP9P49458 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SRP9P49458 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.81■□□□□ 0.6
SRP9P49458 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.81■□□□□ 0.6
SRP9P49458 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SRP9P49458 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP9P49458 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SRP9P49458 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP9P49458 PBX2P1-201ENST00000493219 1291 ntBASIC18.8■□□□□ 0.6
SRP9P49458 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.8■□□□□ 0.6
SRP9P49458 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.8■□□□□ 0.6
SRP9P49458 AL139246.5-201ENST00000606645 996 ntBASIC18.8■□□□□ 0.6
SRP9P49458 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP9P49458 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP9P49458 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SRP9P49458 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SRP9P49458 AC244015.2-201ENST00000616358 1861 ntBASIC18.8■□□□□ 0.6
SRP9P49458 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.79■□□□□ 0.6
SRP9P49458 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.79■□□□□ 0.6
SRP9P49458 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.79■□□□□ 0.6
SRP9P49458 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.79■□□□□ 0.6
SRP9P49458 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.79■□□□□ 0.6
SRP9P49458 AC136469.2-201ENST00000623944 1028 ntBASIC18.79■□□□□ 0.6
SRP9P49458 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SRP9P49458 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SRP9P49458 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.79■□□□□ 0.6
SRP9P49458 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP9P49458 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.78■□□□□ 0.6
SRP9P49458 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP9P49458 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SRP9P49458 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
SRP9P49458 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP9P49458 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SRP9P49458 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP9P49458 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SRP9P49458 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SRP9P49458 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.78■□□□□ 0.6
SRP9P49458 AC024257.2-201ENST00000549699 147 ntBASIC18.78■□□□□ 0.6
SRP9P49458 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms