Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF13O43567 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF13O43567 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.37■□□□□ 0.69
RNF13O43567 AP005435.1-201ENST00000529293 1178 ntBASIC19.37■□□□□ 0.69
RNF13O43567 AC024257.2-201ENST00000549699 147 ntBASIC19.37■□□□□ 0.69
RNF13O43567 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF13O43567 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.37■□□□□ 0.69
RNF13O43567 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
RNF13O43567 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RNF13O43567 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF13O43567 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RNF13O43567 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 OXCT2P1-201ENST00000447263 1535 ntBASIC19.36■□□□□ 0.69
RNF13O43567 AC135279.3-201ENST00000610945 1311 ntBASIC19.36■□□□□ 0.69
RNF13O43567 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.36■□□□□ 0.69
RNF13O43567 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RNF13O43567 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RNF13O43567 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF13O43567 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF13O43567 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
RNF13O43567 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RNF13O43567 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF13O43567 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
RNF13O43567 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF13O43567 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF13O43567 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.35■□□□□ 0.69
RNF13O43567 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.35■□□□□ 0.69
RNF13O43567 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF13O43567 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF13O43567 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF13O43567 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RNF13O43567 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF13O43567 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF13O43567 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF13O43567 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
RNF13O43567 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF13O43567 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RNF13O43567 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF13O43567 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF13O43567 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RNF13O43567 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF13O43567 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.33■□□□□ 0.69
RNF13O43567 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF13O43567 BX842568.3-201ENST00000418104 571 ntBASIC19.33■□□□□ 0.68
RNF13O43567 AC096631.2-201ENST00000436136 790 ntBASIC19.33■□□□□ 0.68
RNF13O43567 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF13O43567 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF13O43567 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF13O43567 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF13O43567 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF13O43567 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF13O43567 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF13O43567 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF13O43567 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF13O43567 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF13O43567 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF13O43567 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
RNF13O43567 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF13O43567 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF13O43567 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF13O43567 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF13O43567 AC244015.2-201ENST00000616358 1861 ntBASIC19.32■□□□□ 0.68
RNF13O43567 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF13O43567 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms