Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCP4L1A6NKN8 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCP4L1A6NKN8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCP4L1A6NKN8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCP4L1A6NKN8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
PCP4L1A6NKN8 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCP4L1A6NKN8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCP4L1A6NKN8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCP4L1A6NKN8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCP4L1A6NKN8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCP4L1A6NKN8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
PCP4L1A6NKN8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 SMG8-203ENST00000578922 2178 ntBASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCP4L1A6NKN8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 ANOS2P-203ENST00000472227 1816 ntBASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCP4L1A6NKN8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCP4L1A6NKN8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms