Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.26■□□□□ 0.99
CCDC189A1A4V9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC189A1A4V9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.25■□□□□ 0.99
CCDC189A1A4V9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC189A1A4V9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 FAM99A-202ENST00000538190 1989 ntBASIC21.23■□□□□ 0.99
CCDC189A1A4V9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CCDC189A1A4V9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.22■□□□□ 0.99
CCDC189A1A4V9 AC026310.3-201ENST00000625186 2373 ntBASIC21.22■□□□□ 0.99
CCDC189A1A4V9 OR7E47P-201ENST00000546390 1422 ntBASIC21.21■□□□□ 0.99
CCDC189A1A4V9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC189A1A4V9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms