Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV13-1A0A0B4J241 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-1A0A0B4J241 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV13-1A0A0B4J241 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV13-1A0A0B4J241 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV13-1A0A0B4J241 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV13-1A0A0B4J241 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 Z98882.1-201ENST00000622160 2253 ntBASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 AC092028.1-203ENST00000608262 953 ntBASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV13-1A0A0B4J241 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 RNF146-205ENST00000477776 762 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TRAV13-1A0A0B4J241 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 CD72-202ENST00000378430 585 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 AF106564.1-201ENST00000607058 2553 ntBASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV13-1A0A0B4J241 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV13-1A0A0B4J241 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms