Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC108482.1-201ENST00000523413 722 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 MIR4418-201ENST00000581169 62 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 AC009271.1-201ENST00000589440 518 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 KIAA1683-206ENST00000600328 3819 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 ECSCR-201ENST00000618155 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 PEX5L-201ENST00000263962 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 SLAMF7-201ENST00000359331 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 SLC16A6-205ENST00000620436 2055 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 FRMPD1-202ENST00000377765 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 B3GALT5-201ENST00000343118 2606 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 KIAA1191-212ENST00000614420 2631 ntTSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 KIAA0907-203ENST00000368321 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 FCHO1-218ENST00000596951 2979 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 SLC22A8-210ENST00000545207 1622 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 OR2A14-202ENST00000641068 2199 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 CAPN9-202ENST00000354537 2484 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 POM121B-201ENST00000380760 2487 ntBASIC12.29□□□□□ -0.44
LMO3Q8TAP4 PRG2-204ENST00000533605 1350 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LMO3Q8TAP4 PRMT2-205ENST00000397637 2880 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 TM2D3-215ENST00000561373 1734 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC022613.2-201ENST00000557989 1451 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 FANCM-208ENST00000556036 2354 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 GRM4-201ENST00000374177 3590 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 NLK-203ENST00000582037 1503 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 PPME1-202ENST00000398427 2496 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 SLC25A25-202ENST00000373066 3714 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 GNE-203ENST00000447283 2174 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC009716.2-201ENST00000624840 3765 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 IL1RAP-210ENST00000434491 1565 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 CTCFL-202ENST00000371196 3491 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 TREM2-201ENST00000338469 860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AL354979.1-201ENST00000369027 266 ntTSL 3 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC007389.1-202ENST00000377977 1266 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 OR7E89P-201ENST00000411729 822 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 OR7E90P-201ENST00000454836 1029 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 GUSBP8-201ENST00000502652 679 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC090095.1-201ENST00000519275 871 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 ODF3-203ENST00000525282 764 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 BCAR1P1-201ENST00000553953 636 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 BCAR1P2-201ENST00000557707 636 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC106736.1-201ENST00000567721 434 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC090386.1-201ENST00000588766 464 ntTSL 3 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 ZNF233-203ENST00000589522 1120 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 PSMB3-211ENST00000619426 773 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 UMPS-211ENST00000628619 228 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 RBFOX1-208ENST00000547372 3524 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AL512662.2-201ENST00000453174 1963 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 PIP5K1P1-201ENST00000460661 1656 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 FGD5P1-201ENST00000611158 3374 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 CCDC174-201ENST00000303688 2714 ntTSL 5 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 ST6GALNAC5-202ENST00000477717 3751 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 CYP27C1-202ENST00000409327 2092 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC023449.2-201ENST00000620538 2400 ntBASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 AL662899.3-201ENST00000375880 2487 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 SRRM2-AS1-205ENST00000577055 1778 ntTSL 2 BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
LMO3Q8TAP4 SNRK-202ENST00000429705 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 ALDH1L1-AS2-202ENST00000500525 2236 ntTSL 2 BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 SLC3A1-201ENST00000260649 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 CBR3-AS1-201ENST00000413862 1543 ntTSL 5 BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 SRP54-213ENST00000556994 2327 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.27□□□□□ -0.44
LMO3Q8TAP4 AC093627.7-201ENST00000567533 3208 ntBASIC12.27□□□□□ -0.44
LMO3Q8TAP4 AP2A1-202ENST00000359032 3286 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 NFKB1-205ENST00000505458 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 MIEF1-203ENST00000404569 3797 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 POTEJ-201ENST00000409602 3383 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 TAAR6-201ENST00000275198 1038 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 CYB5A-201ENST00000299438 718 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 HIST1H3J-201ENST00000359303 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 SRP9-202ENST00000366838 540 ntTSL 2 BASIC12.27□□□□□ -0.45
LMO3Q8TAP4 KRT18P17-201ENST00000396959 1279 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms