RNA–Protein interactions for RNA: ENST00000449576.6

LPIN1-209, Transcript of lipin 1, humanhuman

TSL 2 BASIC

Gene LPIN1, Length 3,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-209ENST00000449576 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
LPIN1-209ENST00000449576 HRCP23327 699 aa19.92■□□□□ 0.78
LPIN1-209ENST00000449576 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
LPIN1-209ENST00000449576 PPARGC1BQ86YN6 1023 aaKnown RBP19.54■□□□□ 0.72
LPIN1-209ENST00000449576 PELP1Q8IZL8 1130 aaKnown RBP19.47■□□□□ 0.71
LPIN1-209ENST00000449576 PCGF6Q9BYE7 350 aa19.45■□□□□ 0.7
LPIN1-209ENST00000449576 SHROOM4Q9ULL8 1493 aa19.35■□□□□ 0.69
LPIN1-209ENST00000449576 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
LPIN1-209ENST00000449576 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.67
LPIN1-209ENST00000449576 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
LPIN1-209ENST00000449576 SCAF1Q9H7N4 1312 aaKnown RBP18.97■□□□□ 0.63
LPIN1-209ENST00000449576 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
LPIN1-209ENST00000449576 ZCCHC6Q5VYS8 1495 aaKnown RBP18.78■□□□□ 0.6
LPIN1-209ENST00000449576 MYT1Q01538 1121 aa18.75■□□□□ 0.59
LPIN1-209ENST00000449576 TRIM26Q12899 539 aaPredicted RBP18.73■□□□□ 0.59
LPIN1-209ENST00000449576 LOC105371045A0A1W2PR82 267 aa18.65■□□□□ 0.58
LPIN1-209ENST00000449576 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
LPIN1-209ENST00000449576 ACIN1Q9UKV3 1341 aaKnown RBP18.43■□□□□ 0.54
LPIN1-209ENST00000449576 NEUROD1Q13562 356 aa18.38■□□□□ 0.53
LPIN1-209ENST00000449576 GTF3C3Q9Y5Q9 886 aa18.31■□□□□ 0.52
LPIN1-209ENST00000449576 CENPBP07199 599 aaPredicted RBP18.18■□□□□ 0.5
LPIN1-209ENST00000449576 NACADO15069 1562 aa18.17■□□□□ 0.5
LPIN1-209ENST00000449576 ABCC9O60706 1549 aa18.17■□□□□ 0.5
LPIN1-209ENST00000449576 DIEXFQ68CQ4 756 aaKnown RBP18.02■□□□□ 0.48
LPIN1-209ENST00000449576 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
LPIN1-209ENST00000449576 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
LPIN1-209ENST00000449576 RB1CC1Q8TDY2 1594 aa17.95■□□□□ 0.46
LPIN1-209ENST00000449576 CCER1Q8TC90 406 aaPredicted RBP17.93■□□□□ 0.46
LPIN1-209ENST00000449576 FAM9AQ8IZU1 332 aaPredicted RBP17.9■□□□□ 0.46
LPIN1-209ENST00000449576 EHMT2Q96KQ7 1210 aa17.87■□□□□ 0.45
LPIN1-209ENST00000449576 TRIM41Q8WV44 630 aa17.83■□□□□ 0.44
LPIN1-209ENST00000449576 YTHDC1Q96MU7 727 aaKnown RBP17.81■□□□□ 0.44
LPIN1-209ENST00000449576 SCRIBQ14160 1630 aa17.75■□□□□ 0.43
LPIN1-209ENST00000449576 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
LPIN1-209ENST00000449576 ZNF316A6NFI3 1004 aaPredicted RBP17.61■□□□□ 0.41
LPIN1-209ENST00000449576 TTBK1Q5TCY1 1321 aaPredicted RBP17.61■□□□□ 0.41
LPIN1-209ENST00000449576 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
LPIN1-209ENST00000449576 MIER1Q8N108 512 aa17.54■□□□□ 0.4
LPIN1-209ENST00000449576 BICRAQ9NZM4 1560 aa17.51■□□□□ 0.39
LPIN1-209ENST00000449576 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
LPIN1-209ENST00000449576 RSF1Q96T23 1441 aaPredicted RBP17.44■□□□□ 0.38
LPIN1-209ENST00000449576 SUPT16HQ9Y5B9 1047 aaKnown RBP17.37■□□□□ 0.37
LPIN1-209ENST00000449576 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
LPIN1-209ENST00000449576 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
LPIN1-209ENST00000449576 CLSPNQ9HAW4 1339 aa17.28■□□□□ 0.36
LPIN1-209ENST00000449576 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
LPIN1-209ENST00000449576 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
LPIN1-209ENST00000449576 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
LPIN1-209ENST00000449576 MROH2BQ7Z745 1585 aa17.18■□□□□ 0.34
LPIN1-209ENST00000449576 SMARCA4P51532 1647 aa17.16■□□□□ 0.34
LPIN1-209ENST00000449576 CEP162Q5TB80 1403 aa17.14■□□□□ 0.33
LPIN1-209ENST00000449576 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
LPIN1-209ENST00000449576 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
LPIN1-209ENST00000449576 WIZO95785 1651 aa17.04■□□□□ 0.32
LPIN1-209ENST00000449576 BCANQ96GW7 911 aa17.03■□□□□ 0.32
LPIN1-209ENST00000449576 PABPN1Q86U42 306 aaKnown RBP eCLIP17.02■□□□□ 0.31
LPIN1-209ENST00000449576 PRKCSHP14314 528 aaPredicted RBP16.98■□□□□ 0.31
LPIN1-209ENST00000449576 TNIKQ9UKE5 1360 aa16.96■□□□□ 0.31
LPIN1-209ENST00000449576 TOP2AP11388 1531 aaKnown RBP16.92■□□□□ 0.3
LPIN1-209ENST00000449576 RBM19Q9Y4C8 960 aaKnown RBP16.92■□□□□ 0.3
LPIN1-209ENST00000449576 UBTFP17480 764 aaKnown RBP16.91■□□□□ 0.3
LPIN1-209ENST00000449576 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
LPIN1-209ENST00000449576 EIF4G1Q04637 1599 aaKnown RBP16.89■□□□□ 0.29
LPIN1-209ENST00000449576 FKBP8Q14318 412 aa16.89■□□□□ 0.29
LPIN1-209ENST00000449576 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
LPIN1-209ENST00000449576 SOGA1O94964 1423 aa16.85■□□□□ 0.29
LPIN1-209ENST00000449576 SMARCA2P51531 1590 aa16.85■□□□□ 0.29
LPIN1-209ENST00000449576 KCNH8Q96L42 1107 aa16.84■□□□□ 0.29
LPIN1-209ENST00000449576 ATAD2BQ9ULI0 1458 aa16.83■□□□□ 0.29
LPIN1-209ENST00000449576 MSH5O43196 834 aa16.79■□□□□ 0.28
LPIN1-209ENST00000449576 HMGXB3Q12766 1538 aa16.77■□□□□ 0.28
LPIN1-209ENST00000449576 ITGAEP38570 1179 aa16.76■□□□□ 0.27
LPIN1-209ENST00000449576 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
LPIN1-209ENST00000449576 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
LPIN1-209ENST00000449576 NEFLP07196 543 aa16.74■□□□□ 0.27
LPIN1-209ENST00000449576 GOLGA3Q08378 1498 aa16.74■□□□□ 0.27
LPIN1-209ENST00000449576 DHX57Q6P158 1386 aaKnown RBP16.74■□□□□ 0.27
LPIN1-209ENST00000449576 EEA1Q15075 1411 aa16.71■□□□□ 0.26
LPIN1-209ENST00000449576 ERICH6Q7L0X2 663 aa16.69■□□□□ 0.26
LPIN1-209ENST00000449576 APLP2Q06481 763 aa16.68■□□□□ 0.26
LPIN1-209ENST00000449576 BAZ1BQ9UIG0 1483 aaKnown RBP16.65■□□□□ 0.26
LPIN1-209ENST00000449576 CLIP1P30622 1438 aa16.64■□□□□ 0.25
LPIN1-209ENST00000449576 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
LPIN1-209ENST00000449576 CC2D2AQ9P2K1 1620 aa16.61■□□□□ 0.25
LPIN1-209ENST00000449576 FANCIQ9NVI1 1328 aa16.6■□□□□ 0.25
LPIN1-209ENST00000449576 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
LPIN1-209ENST00000449576 DEKP35659 375 aaKnown RBP16.56■□□□□ 0.24
LPIN1-209ENST00000449576 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
LPIN1-209ENST00000449576 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
LPIN1-209ENST00000449576 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
LPIN1-209ENST00000449576 MYT1LQ9UL68 1186 aa16.52■□□□□ 0.23
LPIN1-209ENST00000449576 CDK11AQ9UQ88 783 aaPredicted RBP16.5■□□□□ 0.23
LPIN1-209ENST00000449576 ANO8Q9HCE9 1232 aaPredicted RBP16.49■□□□□ 0.23
LPIN1-209ENST00000449576 KIF21BO75037 1637 aa16.47■□□□□ 0.23
LPIN1-209ENST00000449576 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
LPIN1-209ENST00000449576 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
LPIN1-209ENST00000449576 CCER2I3L3R5 266 aa16.38■□□□□ 0.21
LPIN1-209ENST00000449576 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
LPIN1-209ENST00000449576 RAPGEF2Q9Y4G8 1499 aa16.38■□□□□ 0.21
LPIN1-209ENST00000449576 ANP32CO43423 234 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms