RNA–Protein interactions for RNA: ENST00000396959.2

KRT18P17-201, Transcript of keratin 18 pseudogene 17, humanhuman

BASIC

Gene KRT18P17, Length 1,279 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P17-201ENST00000396959 NISCHQ9Y2I1 1504 aa26.76■■□□□ 1.87
KRT18P17-201ENST00000396959 CCDC180Q9P1Z9 1646 aa23.56■■□□□ 1.36
KRT18P17-201ENST00000396959 ABCC9O60706 1549 aa23.33■■□□□ 1.32
KRT18P17-201ENST00000396959 ZCCHC6Q5VYS8 1495 aaKnown RBP22.41■■□□□ 1.18
KRT18P17-201ENST00000396959 DCAF1Q9Y4B6 1507 aa22.22■■□□□ 1.15
KRT18P17-201ENST00000396959 MYO15BQ96JP2 1530 aa22.15■■□□□ 1.14
KRT18P17-201ENST00000396959 DNAJC5BQ9UF47 199 aa22.12■■□□□ 1.13
KRT18P17-201ENST00000396959 NACADO15069 1562 aa22.04■■□□□ 1.12
KRT18P17-201ENST00000396959 RB1CC1Q8TDY2 1594 aa22.01■■□□□ 1.11
KRT18P17-201ENST00000396959 DCAF8L2P0C7V8 631 aa21.97■■□□□ 1.11
KRT18P17-201ENST00000396959 UNC13AQ9UPW8 1703 aa21.89■■□□□ 1.09
KRT18P17-201ENST00000396959 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
KRT18P17-201ENST00000396959 BICRAQ9NZM4 1560 aa21.53■■□□□ 1.04
KRT18P17-201ENST00000396959 SCRIBQ14160 1630 aa21.47■■□□□ 1.03
KRT18P17-201ENST00000396959 SHROOM4Q9ULL8 1493 aa21.31■■□□□ 1
KRT18P17-201ENST00000396959 CC2D2AQ9P2K1 1620 aa21.1■□□□□ 0.97
KRT18P17-201ENST00000396959 CECR2Q9BXF3 1484 aa20.95■□□□□ 0.94
KRT18P17-201ENST00000396959 EIF4G1Q04637 1599 aaKnown RBP20.93■□□□□ 0.94
KRT18P17-201ENST00000396959 BAZ1AQ9NRL2 1556 aaPredicted RBP20.68■□□□□ 0.9
KRT18P17-201ENST00000396959 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
KRT18P17-201ENST00000396959 MROH2BQ7Z745 1585 aa20.63■□□□□ 0.89
KRT18P17-201ENST00000396959 RSF1Q96T23 1441 aaPredicted RBP20.59■□□□□ 0.89
KRT18P17-201ENST00000396959 PEG3Q9GZU2 1588 aa20.5■□□□□ 0.87
KRT18P17-201ENST00000396959 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
KRT18P17-201ENST00000396959 WIZO95785 1651 aa20.4■□□□□ 0.86
KRT18P17-201ENST00000396959 SMARCA2P51531 1590 aa20.38■□□□□ 0.85
KRT18P17-201ENST00000396959 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
KRT18P17-201ENST00000396959 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
KRT18P17-201ENST00000396959 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
KRT18P17-201ENST00000396959 HMGXB3Q12766 1538 aa20.28■□□□□ 0.84
KRT18P17-201ENST00000396959 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
KRT18P17-201ENST00000396959 BAZ1BQ9UIG0 1483 aaKnown RBP20.22■□□□□ 0.83
KRT18P17-201ENST00000396959 CUX2O14529 1486 aa20.05■□□□□ 0.8
KRT18P17-201ENST00000396959 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
KRT18P17-201ENST00000396959 NESP48681 1621 aa20.03■□□□□ 0.8
KRT18P17-201ENST00000396959 CCDC88BA6NC98 1476 aa19.99■□□□□ 0.79
KRT18P17-201ENST00000396959 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
KRT18P17-201ENST00000396959 THOC2Q8NI27 1593 aaKnown RBP19.88■□□□□ 0.77
KRT18P17-201ENST00000396959 CFTRP13569 1480 aa19.77■□□□□ 0.76
KRT18P17-201ENST00000396959 CADPSQ9ULU8 1353 aa19.75■□□□□ 0.75
KRT18P17-201ENST00000396959 LAMC3Q9Y6N6 1575 aa19.7■□□□□ 0.74
KRT18P17-201ENST00000396959 PRDM2Q13029 1718 aa19.62■□□□□ 0.73
KRT18P17-201ENST00000396959 PDS5BQ9NTI5 1447 aa19.51■□□□□ 0.71
KRT18P17-201ENST00000396959 FANCD2Q9BXW9 1451 aa19.49■□□□□ 0.71
KRT18P17-201ENST00000396959 WDR62O43379 1518 aa19.45■□□□□ 0.7
KRT18P17-201ENST00000396959 MRC2Q9UBG0 1479 aa19.44■□□□□ 0.7
KRT18P17-201ENST00000396959 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
KRT18P17-201ENST00000396959 CEP164Q9UPV0 1460 aa19.4■□□□□ 0.7
KRT18P17-201ENST00000396959 ABCC8Q09428 1581 aa19.37■□□□□ 0.69
KRT18P17-201ENST00000396959 CHIC1Q5VXU3 224 aa19.35■□□□□ 0.69
KRT18P17-201ENST00000396959 WRNQ14191 1432 aaPredicted RBP eCLIP19.34■□□□□ 0.69
KRT18P17-201ENST00000396959 CUX1P39880 1505 aa19.32■□□□□ 0.68
KRT18P17-201ENST00000396959 URB2Q14146 1524 aaKnown RBP19.3■□□□□ 0.68
KRT18P17-201ENST00000396959 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
KRT18P17-201ENST00000396959 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
KRT18P17-201ENST00000396959 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
KRT18P17-201ENST00000396959 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.68
KRT18P17-201ENST00000396959 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
KRT18P17-201ENST00000396959 FGD5Q6ZNL6 1462 aa19.14■□□□□ 0.65
KRT18P17-201ENST00000396959 POLA1P09884 1462 aaPredicted RBP19.13■□□□□ 0.65
KRT18P17-201ENST00000396959 RIMBP3CA6NJZ7 1639 aa19.09■□□□□ 0.65
KRT18P17-201ENST00000396959 RIMBP3BA6NNM3 1639 aa19.09■□□□□ 0.65
KRT18P17-201ENST00000396959 RIMBP3Q9UFD9 1639 aa19.09■□□□□ 0.65
KRT18P17-201ENST00000396959 TARBP1Q13395 1621 aaKnown RBP19.04■□□□□ 0.64
KRT18P17-201ENST00000396959 SOGA1O94964 1423 aa19.03■□□□□ 0.64
KRT18P17-201ENST00000396959 OSCARQ8IYS5 282 aa19.03■□□□□ 0.64
KRT18P17-201ENST00000396959 ZNF608Q9ULD9 1512 aaPredicted RBP19.03■□□□□ 0.64
KRT18P17-201ENST00000396959 RAD54L2Q9Y4B4 1467 aa19.03■□□□□ 0.64
KRT18P17-201ENST00000396959 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
KRT18P17-201ENST00000396959 WDR97A6NE52 1622 aa19■□□□□ 0.63
KRT18P17-201ENST00000396959 IFT140Q96RY7 1462 aa19■□□□□ 0.63
KRT18P17-201ENST00000396959 CHD1O14646 1710 aa18.99■□□□□ 0.63
KRT18P17-201ENST00000396959 EIF4G3O43432 1585 aaKnown RBP18.95■□□□□ 0.62
KRT18P17-201ENST00000396959 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
KRT18P17-201ENST00000396959 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
KRT18P17-201ENST00000396959 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.62
KRT18P17-201ENST00000396959 EEA1Q15075 1411 aa18.89■□□□□ 0.61
KRT18P17-201ENST00000396959 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
KRT18P17-201ENST00000396959 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
KRT18P17-201ENST00000396959 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
KRT18P17-201ENST00000396959 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
KRT18P17-201ENST00000396959 IGF1RP08069 1367 aa18.81■□□□□ 0.6
KRT18P17-201ENST00000396959 ERICH3Q5RHP9 1530 aa18.79■□□□□ 0.6
KRT18P17-201ENST00000396959 CSRNP3Q8WYN3 585 aa18.77■□□□□ 0.6
KRT18P17-201ENST00000396959 GRIN2BQ13224 1484 aa18.76■□□□□ 0.59
KRT18P17-201ENST00000396959 PBRM1Q86U86 1689 aa18.75■□□□□ 0.59
KRT18P17-201ENST00000396959 ARAP1Q96P48 1450 aa18.72■□□□□ 0.59
KRT18P17-201ENST00000396959 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
KRT18P17-201ENST00000396959 FAM9AQ8IZU1 332 aaPredicted RBP18.71■□□□□ 0.59
KRT18P17-201ENST00000396959 CYB5RLQ6IPT4 315 aa18.69■□□□□ 0.58
KRT18P17-201ENST00000396959 CUL7Q14999 1698 aa18.69■□□□□ 0.58
KRT18P17-201ENST00000396959 MAGI1Q96QZ7 1491 aaPredicted RBP18.67■□□□□ 0.58
KRT18P17-201ENST00000396959 KIF21BO75037 1637 aa18.67■□□□□ 0.58
KRT18P17-201ENST00000396959 CARMIL1Q5VZK9 1371 aa18.67■□□□□ 0.58
KRT18P17-201ENST00000396959 ADAMTS12P58397 1594 aa18.65■□□□□ 0.58
KRT18P17-201ENST00000396959 SNAPC4Q5SXM2 1469 aa18.65■□□□□ 0.58
KRT18P17-201ENST00000396959 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
KRT18P17-201ENST00000396959 FBLN2P98095 1184 aa18.62■□□□□ 0.57
KRT18P17-201ENST00000396959 RAPGEF2Q9Y4G8 1499 aa18.61■□□□□ 0.57
KRT18P17-201ENST00000396959 CLASP1Q7Z460 1538 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms