Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF6Q9Y252 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF6Q9Y252 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF6Q9Y252 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF6Q9Y252 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF6Q9Y252 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF6Q9Y252 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF6Q9Y252 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF6Q9Y252 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF6Q9Y252 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF6Q9Y252 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF6Q9Y252 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF6Q9Y252 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF6Q9Y252 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF6Q9Y252 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF6Q9Y252 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF6Q9Y252 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF6Q9Y252 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RNF6Q9Y252 AC073130.3-201ENST00000624389 2278 ntBASIC20.04■□□□□ 0.8
RNF6Q9Y252 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF6Q9Y252 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF6Q9Y252 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF6Q9Y252 pRNA.6-201ENST00000610482 90 ntBASIC20.03■□□□□ 0.8
RNF6Q9Y252 pRNA.5-201ENST00000612139 90 ntBASIC20.03■□□□□ 0.8
RNF6Q9Y252 pRNA.11-201ENST00000618423 90 ntBASIC20.03■□□□□ 0.8
RNF6Q9Y252 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF6Q9Y252 pRNA.13-201ENST00000619112 90 ntBASIC20.03■□□□□ 0.8
RNF6Q9Y252 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF6Q9Y252 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.03■□□□□ 0.8
RNF6Q9Y252 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF6Q9Y252 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF6Q9Y252 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RNF6Q9Y252 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RNF6Q9Y252 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RNF6Q9Y252 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF6Q9Y252 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF6Q9Y252 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF6Q9Y252 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF6Q9Y252 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF6Q9Y252 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF6Q9Y252 AC144652.1-201ENST00000609974 1624 ntBASIC20.01■□□□□ 0.79
RNF6Q9Y252 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RNF6Q9Y252 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
RNF6Q9Y252 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20■□□□□ 0.79
RNF6Q9Y252 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20■□□□□ 0.79
RNF6Q9Y252 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF6Q9Y252 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RNF6Q9Y252 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 AC126544.1-201ENST00000580842 1059 ntBASIC20■□□□□ 0.79
RNF6Q9Y252 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
RNF6Q9Y252 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RNF6Q9Y252 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20■□□□□ 0.79
RNF6Q9Y252 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RNF6Q9Y252 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF6Q9Y252 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF6Q9Y252 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF6Q9Y252 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF6Q9Y252 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF6Q9Y252 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF6Q9Y252 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF6Q9Y252 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
RNF6Q9Y252 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF6Q9Y252 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF6Q9Y252 AL121603.2-201ENST00000557373 2117 ntBASIC19.99■□□□□ 0.79
RNF6Q9Y252 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF6Q9Y252 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF6Q9Y252 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RNF6Q9Y252 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms