Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 RNA5SP413-201ENST00000516373 109 ntBASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.65■■□□□ 1.38
TRMT13Q9NUP7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRMT13Q9NUP7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
TRMT13Q9NUP7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 POU5F1P3-201ENST00000428824 1078 ntBASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRMT13Q9NUP7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 AC093787.1-201ENST00000450396 207 ntBASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 AP006587.3-201ENST00000525742 1516 ntBASIC23.63■■□□□ 1.37
TRMT13Q9NUP7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 AC093827.2-201ENST00000512654 315 ntBASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 AC053503.5-201ENST00000601508 636 ntBASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.62■■□□□ 1.37
TRMT13Q9NUP7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRMT13Q9NUP7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 AC007322.4-201ENST00000509611 723 ntBASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 AL034346.1-201ENST00000568244 1277 ntBASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 AC016405.3-201ENST00000607710 860 ntBASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRMT13Q9NUP7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 ITM2C-210ENST00000620962 501 ntBASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.59■■□□□ 1.37
TRMT13Q9NUP7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.58■■□□□ 1.37
TRMT13Q9NUP7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRMT13Q9NUP7 OR10C1-204ENST00000622521 1039 ntBASIC23.58■■□□□ 1.37
TRMT13Q9NUP7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
TRMT13Q9NUP7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC23.57■■□□□ 1.36
TRMT13Q9NUP7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRMT13Q9NUP7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRMT13Q9NUP7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms