Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 AP005435.1-201ENST00000529293 1178 ntBASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 AC133561.4-201ENST00000566112 224 ntBASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
RSPO3Q9BXY4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 DUX4L19-201ENST00000557448 1267 ntBASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RSPO3Q9BXY4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RSPO3Q9BXY4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 AL136116.3-201ENST00000402907 1138 ntBASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RSPO3Q9BXY4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 AC087239.1-201ENST00000622671 572 ntBASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 AP004607.7-201ENST00000527152 1677 ntBASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RSPO3Q9BXY4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 UNC93B3-201ENST00000308076 687 ntBASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 MIR4767-201ENST00000582827 78 ntBASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.7■□□□□ 0.74
RSPO3Q9BXY4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms