Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.323e-6■■■□□ 18.3
DDX59Q5T1V6 FLOT2-207ENST00000581509 426 ntTSL 216.62■□□□□ 0.253e-6■■■□□ 18.3
DDX59Q5T1V6 FLOT2-206ENST00000580805 2679 ntTSL 515.77■□□□□ 0.123e-6■■■□□ 18.3
DDX59Q5T1V6 FLOT2-204ENST00000577789 2503 ntTSL 515.74■□□□□ 0.113e-6■■■□□ 18.3
DDX59Q5T1V6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.99□□□□□ -0.013e-6■■■□□ 18.3
DDX59Q5T1V6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.183e-6■■■□□ 18.3
DDX59Q5T1V6 FLOT2-211ENST00000586827 1069 ntTSL 510.64□□□□□ -0.713e-6■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.06■□□□□ 0.642e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.84□□□□□ -0.032e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.132e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-220ENST00000587881 1984 ntTSL 513.83□□□□□ -0.22e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.74□□□□□ -0.212e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-228ENST00000590248 730 ntTSL 212.36□□□□□ -0.432e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.32□□□□□ -0.442e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC10.14□□□□□ -0.792e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-201ENST00000256830 2920 ntTSL 5 BASIC9.69□□□□□ -0.862e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.922e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -12e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.052e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.38□□□□□ -1.072e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.9□□□□□ -1.142e-13■■■□□ 18.3
DDX59Q5T1V6 NEDD4L-234ENST00000592097 582 ntTSL 35.83□□□□□ -1.482e-13■■■□□ 18.3
DDX59Q5T1V6 QPCTL-203ENST00000591606 561 ntTSL 319.05■□□□□ 0.647e-8■■■□□ 18.3
DDX59Q5T1V6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.49■□□□□ 0.397e-8■■■□□ 18.3
DDX59Q5T1V6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.257e-8■■■□□ 18.3
DDX59Q5T1V6 PCBP2-222ENST00000552296 1342 ntAPPRIS ALT1 TSL 5 BASIC7.87□□□□□ -1.153e-16■■■□□ 18.3
DDX59Q5T1V6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.87■■□□□ 1.415e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.36■■□□□ 1.015e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-212ENST00000460424 538 ntTSL 420.87■□□□□ 0.935e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.845e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-203ENST00000411549 1944 ntTSL 1 (best)19.22■□□□□ 0.675e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-207ENST00000440176 1328 ntTSL 219.03■□□□□ 0.645e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-206ENST00000423611 877 ntTSL 318.16■□□□□ 0.55e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-204ENST00000418880 737 ntTSL 317.94■□□□□ 0.465e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.86■□□□□ 0.455e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.59■□□□□ 0.415e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-217ENST00000484284 580 ntTSL 216.13■□□□□ 0.175e-7■■■□□ 18.2
DDX59Q5T1V6 ACAA1-208ENST00000447223 915 ntTSL 314□□□□□ -0.175e-7■■■□□ 18.2
DDX59Q5T1V6 SLC26A6-214ENST00000462009 825 ntTSL 317.94■□□□□ 0.468e-13■■■□□ 18.2
DDX59Q5T1V6 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC12.35□□□□□ -0.438e-13■■■□□ 18.2
DDX59Q5T1V6 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)12.09□□□□□ -0.478e-13■■■□□ 18.2
DDX59Q5T1V6 SLC26A6-215ENST00000466257 706 ntTSL 37.84□□□□□ -1.158e-13■■■□□ 18.2
DDX59Q5T1V6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.73■□□□□ 0.591e-6■■■□□ 18.2
DDX59Q5T1V6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.36■□□□□ 0.531e-6■■■□□ 18.2
DDX59Q5T1V6 MTA1-208ENST00000438610 2144 ntTSL 1 (best)17.48■□□□□ 0.391e-6■■■□□ 18.2
DDX59Q5T1V6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.75■□□□□ 0.111e-6■■■□□ 18.2
DDX59Q5T1V6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.011e-6■■■□□ 18.2
DDX59Q5T1V6 MTA1-219ENST00000551236 461 ntTSL 310.87□□□□□ -0.671e-6■■■□□ 18.2
DDX59Q5T1V6 TEX22-202ENST00000548638 508 ntTSL 510.65□□□□□ -0.71e-6■■■□□ 18.2
DDX59Q5T1V6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.724e-6■■■□□ 18.2
DDX59Q5T1V6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.624e-6■■■□□ 18.2
DDX59Q5T1V6 SS18L1-203ENST00000450482 781 ntTSL 510.35□□□□□ -0.758e-7■■■□□ 18.2
DDX59Q5T1V6 SS18L1-201ENST00000331758 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.948e-7■■■□□ 18.2
DDX59Q5T1V6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.261e-323■■■□□ 18.2
DDX59Q5T1V6 TM9SF4-204ENST00000442842 563 ntTSL 412.55□□□□□ -0.42e-6■■■□□ 18.1
DDX59Q5T1V6 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC11.96□□□□□ -0.492e-6■■■□□ 18.1
DDX59Q5T1V6 TM9SF4-203ENST00000417389 553 ntTSL 410.01□□□□□ -0.812e-6■■■□□ 18.1
DDX59Q5T1V6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.372e-6■■■□□ 18.1
DDX59Q5T1V6 TM9SF4-205ENST00000450829 550 ntTSL 45.47□□□□□ -1.532e-6■■■□□ 18.1
DDX59Q5T1V6 ACTN4-204ENST00000440400 3180 ntTSL 512.52□□□□□ -0.415e-8■■■□□ 18.1
DDX59Q5T1V6 DROSHA-218ENST00000512302 585 ntTSL 413.15□□□□□ -0.39e-26■■■□□ 18.1
DDX59Q5T1V6 ARHGEF1-207ENST00000594258 919 ntTSL 317.71■□□□□ 0.433e-8■■■□□ 18.1
DDX59Q5T1V6 LONP1-204ENST00000586617 471 ntTSL 523.06■■□□□ 1.286e-6■■■□□ 18
DDX59Q5T1V6 LONP1-205ENST00000587365 641 ntTSL 521.52■■□□□ 1.046e-6■■■□□ 18
DDX59Q5T1V6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.62■■□□□ 1.372e-7■■■□□ 18
DDX59Q5T1V6 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.162e-7■■■□□ 18
DDX59Q5T1V6 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.072e-7■■■□□ 18
DDX59Q5T1V6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.932e-7■■■□□ 18
DDX59Q5T1V6 DAZAP1-204ENST00000586579 619 ntTSL 320.52■□□□□ 0.882e-7■■■□□ 18
DDX59Q5T1V6 DAZAP1-210ENST00000592453 1021 ntTSL 514.15□□□□□ -0.142e-7■■■□□ 18
DDX59Q5T1V6 TFR2-204ENST00000462090 1844 ntTSL 517.87■□□□□ 0.452e-11■■■□□ 18
DDX59Q5T1V6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.59■□□□□ 0.416e-8■■■□□ 18
DDX59Q5T1V6 PPP1R13L-203ENST00000585905 2176 ntTSL 217.57■□□□□ 0.46e-8■■■□□ 18
DDX59Q5T1V6 AL162741.1-201ENST00000565563 1558 ntBASIC17.53■□□□□ 0.46e-8■■■□□ 18
DDX59Q5T1V6 TFR2-212ENST00000476304 2421 ntTSL 516.51■□□□□ 0.232e-11■■■□□ 18
DDX59Q5T1V6 TFR2-213ENST00000490084 2196 ntTSL 216.47■□□□□ 0.232e-11■■■□□ 18
DDX59Q5T1V6 TFR2-203ENST00000461176 692 ntTSL 315.65■□□□□ 0.12e-11■■■□□ 18
DDX59Q5T1V6 ABCC3-204ENST00000503304 542 ntTSL 515.1■□□□□ 0.012e-11■■■□□ 18
DDX59Q5T1V6 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.02■□□□□ -06e-8■■■□□ 18
DDX59Q5T1V6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.116e-8■■■□□ 18
DDX59Q5T1V6 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.256e-8■■■□□ 18
DDX59Q5T1V6 ATP11A-211ENST00000479193 621 ntTSL 213.22□□□□□ -0.291e-14■■■□□ 18
DDX59Q5T1V6 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.44□□□□□ -0.426e-8■■■□□ 18
DDX59Q5T1V6 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.426e-8■■■□□ 18
DDX59Q5T1V6 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.432e-11■■■□□ 18
DDX59Q5T1V6 POFUT2-202ENST00000334538 3077 ntTSL 1 (best)12.21□□□□□ -0.466e-8■■■□□ 18
DDX59Q5T1V6 POFUT2-208ENST00000471540 3176 ntTSL 512.18□□□□□ -0.466e-8■■■□□ 18
DDX59Q5T1V6 ABCC3-203ENST00000502426 5326 ntTSL 212.16□□□□□ -0.462e-11■■■□□ 18
DDX59Q5T1V6 ABCC3-207ENST00000505699 5271 ntTSL 212.03□□□□□ -0.482e-11■■■□□ 18
DDX59Q5T1V6 HGSNAT-201ENST00000379644 5236 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.556e-8■■■□□ 18
DDX59Q5T1V6 ATP11A-203ENST00000415301 550 ntTSL 411.57□□□□□ -0.561e-14■■■□□ 18
DDX59Q5T1V6 AL132712.1-201ENST00000555967 582 ntTSL 4 BASIC7.2□□□□□ -1.266e-8■■■□□ 18
DDX59Q5T1V6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.5■□□□□ 0.711e-6■■■□□ 18
DDX59Q5T1V6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.79■□□□□ 0.61e-6■■■□□ 18
DDX59Q5T1V6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.351e-6■■■□□ 18
DDX59Q5T1V6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.191e-6■■■□□ 18
DDX59Q5T1V6 TRAF4-207ENST00000461195 787 ntTSL 220.3■□□□□ 0.841e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.79■□□□□ 0.761e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-204ENST00000422344 631 ntTSL 319.72■□□□□ 0.751e-8■■■□□ 18
DDX59Q5T1V6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.65■□□□□ 0.741e-8■■■□□ 18
Retrieved 100 of 7,289 protein–RNA pairs in 119 ms