Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H2P55055 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H2P55055 LINC01006-201ENST00000333319 2292 ntBASIC20.15■□□□□ 0.82
NR1H2P55055 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H2P55055 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.15■□□□□ 0.82
NR1H2P55055 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H2P55055 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.15■□□□□ 0.82
NR1H2P55055 SNX5-217ENST00000606557 1087 ntBASIC20.15■□□□□ 0.82
NR1H2P55055 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.15■□□□□ 0.82
NR1H2P55055 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.15■□□□□ 0.82
NR1H2P55055 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H2P55055 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H2P55055 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.15■□□□□ 0.82
NR1H2P55055 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H2P55055 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H2P55055 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NR1H2P55055 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H2P55055 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NR1H2P55055 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NR1H2P55055 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NR1H2P55055 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.14■□□□□ 0.82
NR1H2P55055 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H2P55055 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H2P55055 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H2P55055 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
NR1H2P55055 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
NR1H2P55055 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H2P55055 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H2P55055 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.14■□□□□ 0.81
NR1H2P55055 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.14■□□□□ 0.81
NR1H2P55055 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H2P55055 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.14■□□□□ 0.81
NR1H2P55055 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H2P55055 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.14■□□□□ 0.81
NR1H2P55055 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H2P55055 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H2P55055 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NR1H2P55055 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H2P55055 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H2P55055 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H2P55055 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H2P55055 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.13■□□□□ 0.81
NR1H2P55055 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.13■□□□□ 0.81
NR1H2P55055 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H2P55055 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.13■□□□□ 0.81
NR1H2P55055 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.13■□□□□ 0.81
NR1H2P55055 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
NR1H2P55055 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NR1H2P55055 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.12■□□□□ 0.81
NR1H2P55055 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
NR1H2P55055 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.12■□□□□ 0.81
NR1H2P55055 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.12■□□□□ 0.81
NR1H2P55055 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NR1H2P55055 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.12■□□□□ 0.81
NR1H2P55055 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 MIR638-201ENST00000385237 100 ntBASIC20.11■□□□□ 0.81
NR1H2P55055 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NR1H2P55055 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NR1H2P55055 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NR1H2P55055 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
NR1H2P55055 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NR1H2P55055 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NR1H2P55055 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.1■□□□□ 0.81
NR1H2P55055 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NR1H2P55055 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.1■□□□□ 0.81
NR1H2P55055 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NR1H2P55055 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 FEM1AP4-201ENST00000443167 1987 ntBASIC20.1■□□□□ 0.81
NR1H2P55055 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NR1H2P55055 ALDH1A3-203ENST00000557963 1670 ntBASIC20.1■□□□□ 0.81
NR1H2P55055 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
NR1H2P55055 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.09■□□□□ 0.81
NR1H2P55055 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.09■□□□□ 0.81
NR1H2P55055 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NR1H2P55055 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms