Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 KYAT1-206ENST00000451800 847 ntTSL 523.22■■□□□ 1.312e-6■□□□□ 10.4
SFPQP23246 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.15■□□□□ 0.342e-6■□□□□ 10.4
SFPQP23246 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.07■□□□□ 0.322e-6■□□□□ 10.4
SFPQP23246 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.022e-6■□□□□ 10.4
SFPQP23246 KYAT1-209ENST00000474824 618 ntTSL 315.07■□□□□ 02e-6■□□□□ 10.4
SFPQP23246 KYAT1-207ENST00000462722 2089 ntTSL 1 (best)14.33□□□□□ -0.122e-6■□□□□ 10.4
SFPQP23246 SH3BP4-207ENST00000454947 500 ntTSL 410.28□□□□□ -0.762e-6■□□□□ 10.4
SFPQP23246 PTPRK-222ENST00000532751 563 ntTSL 424.42■■□□□ 1.56e-7■□□□□ 10.4
SFPQP23246 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.68■□□□□ 0.96e-7■□□□□ 10.4
SFPQP23246 PTPRK-208ENST00000392449 1456 ntTSL 218.57■□□□□ 0.566e-7■□□□□ 10.4
SFPQP23246 NHSL1-207ENST00000491526 506 ntAPPRIS ALT2 TSL 315.45■□□□□ 0.061e-6■□□□□ 10.4
SFPQP23246 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.051e-6■□□□□ 10.4
SFPQP23246 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.224e-7■□□□□ 10.3
SFPQP23246 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.444e-7■□□□□ 10.3
SFPQP23246 CARHSP1-215ENST00000570125 681 ntTSL 431.57■■■□□ 2.641e-6■□□□□ 10.3
SFPQP23246 CARHSP1-206ENST00000563815 1913 ntTSL 221.91■■□□□ 1.11e-6■□□□□ 10.3
SFPQP23246 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 11e-6■□□□□ 10.3
SFPQP23246 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.811e-6■□□□□ 10.3
SFPQP23246 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.77■□□□□ 0.761e-6■□□□□ 10.3
SFPQP23246 CARHSP1-204ENST00000562586 578 ntTSL 217.89■□□□□ 0.451e-6■□□□□ 10.3
SFPQP23246 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.271e-6■□□□□ 10.3
SFPQP23246 CARHSP1-214ENST00000569572 578 ntTSL 315.71■□□□□ 0.111e-6■□□□□ 10.3
SFPQP23246 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.061e-6■□□□□ 10.3
SFPQP23246 CARHSP1-207ENST00000565287 556 ntTSL 315.04■□□□□ -01e-6■□□□□ 10.3
SFPQP23246 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.041e-6■□□□□ 10.3
SFPQP23246 FAM208B-205ENST00000473789 506 ntTSL 526.97■■□□□ 1.913e-11■□□□□ 10.3
SFPQP23246 FAM208B-210ENST00000496681 522 ntTSL 326.33■■□□□ 1.813e-11■□□□□ 10.3
SFPQP23246 KIAA0368-206ENST00000602978 539 ntAPPRIS ALT2 TSL 422.67■■□□□ 1.228e-7■□□□□ 10.3
SFPQP23246 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.058e-7■□□□□ 10.3
SFPQP23246 FAM208B-207ENST00000480839 540 ntTSL 321.54■■□□□ 1.043e-11■□□□□ 10.3
SFPQP23246 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.35■■□□□ 1.018e-7■□□□□ 10.3
SFPQP23246 KIAA0368-205ENST00000602447 2806 ntAPPRIS ALT2 TSL 519.97■□□□□ 0.798e-7■□□□□ 10.3
SFPQP23246 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.673e-11■□□□□ 10.3
SFPQP23246 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.618e-7■□□□□ 10.3
SFPQP23246 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.598e-7■□□□□ 10.3
SFPQP23246 FAM208B-206ENST00000477043 514 ntTSL 218.69■□□□□ 0.583e-11■□□□□ 10.3
SFPQP23246 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.48e-7■□□□□ 10.3
SFPQP23246 SLC39A11-209ENST00000580557 794 ntTSL 315.71■□□□□ 0.118e-7■□□□□ 10.3
SFPQP23246 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.59■□□□□ 0.098e-7■□□□□ 10.3
SFPQP23246 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.078e-7■□□□□ 10.3
SFPQP23246 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC14.47□□□□□ -0.098e-7■□□□□ 10.3
SFPQP23246 SLC39A11-213ENST00000582769 567 ntTSL 514.21□□□□□ -0.138e-7■□□□□ 10.3
SFPQP23246 SLC39A11-206ENST00000579491 692 ntTSL 314.21□□□□□ -0.138e-7■□□□□ 10.3
SFPQP23246 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.158e-7■□□□□ 10.3
SFPQP23246 SLC39A11-217ENST00000584129 747 ntTSL 312.37□□□□□ -0.438e-7■□□□□ 10.3
SFPQP23246 SLC39A11-214ENST00000583146 532 ntTSL 510.42□□□□□ -0.748e-7■□□□□ 10.3
SFPQP23246 ONECUT1-203ENST00000561401 583 ntTSL 39.29□□□□□ -0.928e-7■□□□□ 10.3
SFPQP23246 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.16□□□□□ -1.588e-7■□□□□ 10.3
SFPQP23246 SMG1P3-205ENST00000522480 4262 ntBASIC11.72□□□□□ -0.532e-10■□□□□ 10.3
SFPQP23246 TRIM8-202ENST00000462202 891 ntTSL 524.11■■□□□ 1.454e-6■□□□□ 10.3
SFPQP23246 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.914e-6■□□□□ 10.3
SFPQP23246 LZTS2-205ENST00000454422 804 ntTSL 234.78■■■■□ 3.168e-7■□□□□ 10.3
SFPQP23246 GMDS-207ENST00000530459 520 ntTSL 35.82□□□□□ -1.484e-6■□□□□ 10.3
SFPQP23246 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.33e-7■□□□□ 10.3
SFPQP23246 RAD23B-203ENST00000419616 716 ntTSL 321.17■□□□□ 0.989e-9■□□□□ 10.2
SFPQP23246 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.579e-9■□□□□ 10.2
SFPQP23246 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.21■□□□□ 0.199e-9■□□□□ 10.2
SFPQP23246 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.86□□□□□ -1.319e-9■□□□□ 10.2
SFPQP23246 CCDC144NL-AS1-201ENST00000417232 709 ntTSL 36.33□□□□□ -1.49e-9■□□□□ 10.2
SFPQP23246 RAD23B-204ENST00000442587 456 ntTSL 26□□□□□ -1.459e-9■□□□□ 10.2
SFPQP23246 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.676e-7■□□□□ 10.2
SFPQP23246 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.652e-7■□□□□ 10.2
SFPQP23246 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.592e-7■□□□□ 10.2
SFPQP23246 TRIM24-206ENST00000497516 1515 ntTSL 515.85■□□□□ 0.132e-7■□□□□ 10.2
SFPQP23246 TRIO-221ENST00000513206 7995 ntTSL 518.5■□□□□ 0.552e-6■□□□□ 10.2
SFPQP23246 TRIO-222ENST00000515144 7455 ntTSL 1 (best)16.4■□□□□ 0.222e-6■□□□□ 10.2
SFPQP23246 MIR4651-201ENST00000582622 73 ntBASIC22.73■■□□□ 1.233e-13■□□□□ 10.2
SFPQP23246 FNDC3B-208ENST00000476794 682 ntTSL 36.41□□□□□ -1.381e-6■□□□□ 10.1
SFPQP23246 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.2■□□□□ 0.024e-8■□□□□ 10.1
SFPQP23246 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC14.33□□□□□ -0.112e-6■□□□□ 10.1
SFPQP23246 DLC1-206ENST00000509922 455 ntTSL 411.22□□□□□ -0.612e-6■□□□□ 10.1
SFPQP23246 DLC1-204ENST00000503161 562 ntTSL 411.11□□□□□ -0.632e-6■□□□□ 10.1
SFPQP23246 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.812e-6■□□□□ 10.1
SFPQP23246 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC8.44□□□□□ -1.061e-8■□□□□ 10.1
SFPQP23246 TRIO-218ENST00000512070 8907 ntTSL 216.96■□□□□ 0.311e-6■□□□□ 10.1
SFPQP23246 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.171e-6■□□□□ 10.1
SFPQP23246 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC9.75□□□□□ -0.852e-8■□□□□ 10.1
SFPQP23246 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC14.95□□□□□ -0.022e-8■□□□□ 10.1
SFPQP23246 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.372e-8■□□□□ 10.1
SFPQP23246 VAPB-201ENST00000265619 3596 ntTSL 210.14□□□□□ -0.792e-8■□□□□ 10.1
SFPQP23246 VAPB-206ENST00000520497 937 ntTSL 29.3□□□□□ -0.922e-8■□□□□ 10.1
SFPQP23246 SND1-205ENST00000467238 716 ntTSL 37.88□□□□□ -1.152e-8■□□□□ 10.1
SFPQP23246 TNRC18-206ENST00000434361 577 ntTSL 317.91■□□□□ 0.462e-6■□□□□ 10.1
SFPQP23246 PIP5K1A-206ENST00000424999 567 ntTSL 423.65■■□□□ 1.385e-8■□□□□ 10
SFPQP23246 PIP5K1A-209ENST00000454769 540 ntTSL 421.23■□□□□ 0.995e-8■□□□□ 10
SFPQP23246 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.1■□□□□ 0.815e-8■□□□□ 10
SFPQP23246 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.385e-8■□□□□ 10
SFPQP23246 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.025e-8■□□□□ 10
SFPQP23246 PIP5K1A-201ENST00000349792 3767 ntAPPRIS P3 TSL 1 (best)13.31□□□□□ -0.285e-8■□□□□ 10
SFPQP23246 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.285e-8■□□□□ 10
SFPQP23246 PIP5K1A-208ENST00000447555 373 ntTSL 1 (best)7.09□□□□□ -1.275e-8■□□□□ 10
SFPQP23246 PIP5K1A-205ENST00000418435 353 ntTSL 55.44□□□□□ -1.545e-8■□□□□ 10
SFPQP23246 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.64■□□□□ 0.95e-7■□□□□ 10
SFPQP23246 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.56■□□□□ 0.45e-7■□□□□ 10
SFPQP23246 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.015e-7■□□□□ 10
SFPQP23246 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.13□□□□□ -1.275e-7■□□□□ 10
SFPQP23246 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.88□□□□□ -1.475e-7■□□□□ 10
SFPQP23246 PTPRK-201ENST00000368202 526 ntTSL 213.32□□□□□ -0.288e-8■□□□□ 10
SFPQP23246 CDK6-204ENST00000473078 386 ntTSL 21.84□□□□□ -2.119e-8■□□□□ 10
SFPQP23246 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.51e-6■□□□□ 10
Retrieved 100 of 4,991 protein–RNA pairs in 176.8 ms