Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AC096631.2-201ENST00000436136 790 ntBASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.74■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
IGHV3-43A0A0B4J1X8 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AC135279.3-201ENST00000610945 1311 ntBASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IGHV3-43A0A0B4J1X8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AP005435.1-201ENST00000529293 1178 ntBASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.71■□□□□ 0.43
IGHV3-43A0A0B4J1X8 AC026310.3-201ENST00000625186 2373 ntBASIC17.71■□□□□ 0.42
IGHV3-43A0A0B4J1X8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 BX842568.3-201ENST00000418104 571 ntBASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 PBX2P1-201ENST00000493219 1291 ntBASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 AC126544.1-201ENST00000580842 1059 ntBASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV3-43A0A0B4J1X8 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms