Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
DDX4Q9NQI0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 GPX1P1-201ENST00000388829 606 ntBASIC25.51■■□□□ 1.67
DDX4Q9NQI0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
DDX4Q9NQI0 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 CNN2P6-201ENST00000439038 900 ntBASIC25.5■■□□□ 1.67
DDX4Q9NQI0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC25.5■■□□□ 1.67
DDX4Q9NQI0 AC231657.2-201ENST00000624556 255 ntBASIC25.5■■□□□ 1.67
DDX4Q9NQI0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.49■■□□□ 1.67
DDX4Q9NQI0 GUSBP6-202ENST00000438529 1198 ntBASIC25.49■■□□□ 1.67
DDX4Q9NQI0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 EEF1DP3-203ENST00000566025 782 ntBASIC25.49■■□□□ 1.67
DDX4Q9NQI0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
DDX4Q9NQI0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 AC007322.1-201ENST00000426983 750 ntBASIC25.48■■□□□ 1.67
DDX4Q9NQI0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 AL034346.1-201ENST00000568244 1277 ntBASIC25.48■■□□□ 1.67
DDX4Q9NQI0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
DDX4Q9NQI0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 AC005181.1-201ENST00000604782 1256 ntBASIC25.47■■□□□ 1.67
DDX4Q9NQI0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
DDX4Q9NQI0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
DDX4Q9NQI0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.46■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms