Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HINT3Q9NQE9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HINT3Q9NQE9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HINT3Q9NQE9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HINT3Q9NQE9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.37■□□□□ 0.69
HINT3Q9NQE9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HINT3Q9NQE9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HINT3Q9NQE9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 AC079089.2-201ENST00000531211 1277 ntBASIC19.35■□□□□ 0.69
HINT3Q9NQE9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HINT3Q9NQE9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.34■□□□□ 0.69
HINT3Q9NQE9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HINT3Q9NQE9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HINT3Q9NQE9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.33■□□□□ 0.69
HINT3Q9NQE9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HINT3Q9NQE9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HINT3Q9NQE9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HINT3Q9NQE9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.33■□□□□ 0.69
HINT3Q9NQE9 SRD5A1P1-201ENST00000442297 786 ntBASIC19.33■□□□□ 0.68
HINT3Q9NQE9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.33■□□□□ 0.68
HINT3Q9NQE9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HINT3Q9NQE9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HINT3Q9NQE9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HINT3Q9NQE9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HINT3Q9NQE9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.33■□□□□ 0.68
HINT3Q9NQE9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.33■□□□□ 0.68
HINT3Q9NQE9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 AC133637.1-201ENST00000624115 1537 ntBASIC19.32■□□□□ 0.68
HINT3Q9NQE9 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.32■□□□□ 0.68
HINT3Q9NQE9 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 AC241377.3-202ENST00000626088 1088 ntBASIC19.31■□□□□ 0.68
HINT3Q9NQE9 AC241585.3-202ENST00000628937 1088 ntBASIC19.31■□□□□ 0.68
HINT3Q9NQE9 AC245100.8-202ENST00000629247 1058 ntBASIC19.31■□□□□ 0.68
HINT3Q9NQE9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
HINT3Q9NQE9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms