Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
SCAF1Q9H7N4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SCAF1Q9H7N4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SCAF1Q9H7N4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
SCAF1Q9H7N4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC31.74■■■□□ 2.67
SCAF1Q9H7N4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC31.74■■■□□ 2.67
SCAF1Q9H7N4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 ECEL1P1-201ENST00000373592 1742 ntBASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.73■■■□□ 2.67
SCAF1Q9H7N4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SCAF1Q9H7N4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC31.72■■■□□ 2.67
SCAF1Q9H7N4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SCAF1Q9H7N4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SCAF1Q9H7N4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.72■■■□□ 2.67
SCAF1Q9H7N4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
SCAF1Q9H7N4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.72■■■□□ 2.67
SCAF1Q9H7N4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
SCAF1Q9H7N4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.7■■■□□ 2.67
SCAF1Q9H7N4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC31.7■■■□□ 2.67
SCAF1Q9H7N4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC31.7■■■□□ 2.67
SCAF1Q9H7N4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SCAF1Q9H7N4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
SCAF1Q9H7N4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC31.7■■■□□ 2.67
SCAF1Q9H7N4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC31.7■■■□□ 2.67
SCAF1Q9H7N4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.7■■■□□ 2.66
SCAF1Q9H7N4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
SCAF1Q9H7N4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 AC011767.1-201ENST00000617410 1153 ntBASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC31.68■■■□□ 2.66
SCAF1Q9H7N4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SCAF1Q9H7N4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SCAF1Q9H7N4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
SCAF1Q9H7N4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.67■■■□□ 2.66
SCAF1Q9H7N4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
SCAF1Q9H7N4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
SCAF1Q9H7N4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SCAF1Q9H7N4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC31.66■■■□□ 2.66
SCAF1Q9H7N4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms