Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PHACTR1Q9C0D0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 UNC93B8-201ENST00000511903 705 ntBASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PHACTR1Q9C0D0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 AC010141.3-201ENST00000456659 717 ntBASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 AL034346.1-201ENST00000568244 1277 ntBASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PHACTR1Q9C0D0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 AF106564.1-201ENST00000607058 2553 ntBASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.73■■□□□ 1.07
PHACTR1Q9C0D0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
PHACTR1Q9C0D0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PHACTR1Q9C0D0 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PHACTR1Q9C0D0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PHACTR1Q9C0D0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
PHACTR1Q9C0D0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 MIR3181-201ENST00000578512 73 ntBASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.7■■□□□ 1.06
PHACTR1Q9C0D0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 AC099791.2-201ENST00000605725 427 ntBASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.69■■□□□ 1.06
PHACTR1Q9C0D0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHACTR1Q9C0D0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.68■■□□□ 1.06
PHACTR1Q9C0D0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHACTR1Q9C0D0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHACTR1Q9C0D0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
PHACTR1Q9C0D0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms